Mercurial > repos > mingchen0919 > aurora_deseq2_site

changeset 6:d961c2f5e172 draft

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planemo upload commit 0b6e8a54187fd05c2bd373c8a0d7d23590240404-dirty
author mingchen0919
date Mon, 14 May 2018 14:32:06 -0400
parents 20061de8f3f2
children 90f3027fdb28
files rmarkdown_report.xml
diffstat 1 files changed, 2 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/rmarkdown_report.xml	Mon May 14 11:40:10 2018 -0400
+++ b/rmarkdown_report.xml	Mon May 14 14:32:06 2018 -0400
@@ -47,10 +47,10 @@
     ]]></command>
     <inputs>
         <param type="data" name="count_data" label="Count data"
-               help="an RData file that stores the count matrix data. The file is generated from the aurora_htseq tool."
+               help="The first column is sample names; The remaining columns are read counts from each sample."
                optional="False" format="csv"/>
         <param type="data" name="column_data" label="Column data"
-               help="A table file that stores column data for DESeq2 analysis. The first column are the column names from the count data matrix. The remaining columns are experimental treatments."
+               help="The first column are sample names (column name from the count data); The remaining columns are experimental treatments."
                optional="False" format="csv"/>
         <param type="text" name="design_formula" label="Design formula"
                help="The design formula expresses the variables which will be used in modeling. The formula should be a tilde (~) followed by the variables with plus signs between them, e.g., ~ condition1 + condition2"