annotate README.md @ 0:d42f4d78c85e draft

Uploaded
author messersc
date Wed, 17 Dec 2014 10:40:23 -0500
parents
children 243f75d0ed6e
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
d42f4d78c85e Uploaded
messersc
parents:
diff changeset
1 JAMM: a peak finder for joint analysis of NGS replicates
d42f4d78c85e Uploaded
messersc
parents:
diff changeset
2 ====
d42f4d78c85e Uploaded
messersc
parents:
diff changeset
3 doi: 10.1093/bioinformatics/btu568
d42f4d78c85e Uploaded
messersc
parents:
diff changeset
4
d42f4d78c85e Uploaded
messersc
parents:
diff changeset
5 JAMM (Joint Analysis of NGS replicates via Mixture Model clustering):
d42f4d78c85e Uploaded
messersc
parents:
diff changeset
6 a peak finder that can integrate information from biological replicates,
d42f4d78c85e Uploaded
messersc
parents:
diff changeset
7 determine enrichment site widths accurately and resolve neighboring narrow peaks.
d42f4d78c85e Uploaded
messersc
parents:
diff changeset
8 JAMM is a universal peak finder that is applicable to different types of datasets
d42f4d78c85e Uploaded
messersc
parents:
diff changeset
9
d42f4d78c85e Uploaded
messersc
parents:
diff changeset
10 Galaxy
d42f4d78c85e Uploaded
messersc
parents:
diff changeset
11 ====
d42f4d78c85e Uploaded
messersc
parents:
diff changeset
12
d42f4d78c85e Uploaded
messersc
parents:
diff changeset
13 This is a wrapper for JAMM for use in Galaxy (usegalaxy.org)