Mercurial > repos > melissacline > ucsc_xena_platform
changeset 16:8ac29f84644b
Updated Xena URLs
| author | melissacline |
|---|---|
| date | Tue, 02 Jun 2015 14:50:45 -0700 |
| parents | 98b498545a52 |
| children | 6785e729c7ad |
| files | ucsc_xena_datapages.xml ucsc_xena_hub.xml ucsc_xenabrowser.xml xena_utils.pyc |
| diffstat | 4 files changed, 3 insertions(+), 3 deletions(-) [+] |
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--- a/ucsc_xena_datapages.xml Wed Jan 14 16:35:12 2015 -0800 +++ b/ucsc_xena_datapages.xml Tue Jun 02 14:50:45 2015 -0700 @@ -7,7 +7,7 @@ <tool name="Explore Data in Xena" id="ucsc_xenadatapages" tool_type="data_source"> <description>Browse the UCSC Xena Data Pages.</description> <command interpreter="python">ucsc_xena_download.py $genomic $__app__.config.output_size_limit</command> - <inputs action="https://tcga1.kilokluster.ucsc.edu/~jzhu/proj/site/hgHeatmap-cavm/datapages" check_values="false" method="get"> + <inputs action="https://genome-cancer.ucsc.edu/proj/site/xena/datapages/" check_values="false" method="get"> <display>Explore the data in Xena $GALAXY_URL</display> <param name="GALAXY_URL" type="baseurl" value="/tool_runner" /> <param name="tool_id" type="hidden" value="ucsc_xenadatapages" />
--- a/ucsc_xena_hub.xml Wed Jan 14 16:35:12 2015 -0800 +++ b/ucsc_xena_hub.xml Tue Jun 02 14:50:45 2015 -0700 @@ -7,7 +7,7 @@ <tool name="Xena Data Hub" id="ucsc_xenadatahub" tool_type="data_source"> <description>Select your Xena Data Hub</description> <command interpreter="python">ucsc_xena_download.py $genomic $__app__.config.output_size_limit</command> - <inputs action="https://genome-cancer.ucsc.edu/proj/site/hgHeatmap-cavm/hub/" check_values="false" method="get"> + <inputs action="https://genome-cancer.ucsc.edu/proj/site/xena/hub/" check_values="false" method="get"> <display>Select your Xena Data Hub $GALAXY_URL</display> <param name="GALAXY_URL" type="baseurl" value="/tool_runner" /> <param name="tool_id" type="hidden" value="ucsc_xenadatapages" />
--- a/ucsc_xenabrowser.xml Wed Jan 14 16:35:12 2015 -0800 +++ b/ucsc_xenabrowser.xml Tue Jun 02 14:50:45 2015 -0700 @@ -7,7 +7,7 @@ <tool name="UCSC Xena Browser" id="ucsc_xenabrowser" tool_type="data_source"> <description>Run the UCSC Xena Browser as a Galaxy tool.</description> <command interpreter="python">ucsc_xena_download.py $genomic $clinical $__app__.config.output_size_limit</command> - <inputs action="https://genome-cancer.ucsc.edu/proj/site/hgHeatmap-cavm/" check_values="false" method="get"> + <inputs action="https://genome-cancer.ucsc.edu/proj/site/xena/heatmap/" check_values="false" method="get"> <display>go to UCSC Xena Browser $GALAXY_URL</display> <param name="GALAXY_URL" type="baseurl" value="/tool_runner" /> <param name="tool_id" type="hidden" value="ucsc_xenabrowser" />