Mercurial > repos > melissacline > ucsc_xena_platform

diff xena_import.xml @ 2:6eeb3ca663fb

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Fixed dataset delete bugs (the full pathname was needed) plus changed xena_import to give a checkbox for turning on column normalization
author melissacline
date Wed, 14 Jan 2015 15:21:09 -0800
parents 8bb037f88ed2
children 1707e82d55bc c5b71ce5f7b1
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--- a/xena_import.xml	Wed Jan 14 12:47:23 2015 -0800
+++ b/xena_import.xml	Wed Jan 14 15:21:09 2015 -0800
@@ -24,6 +24,9 @@
             --label  "${xenaInputData.name}"
         #end if
     #end if
+    #if $colNormalization:
+        --colNormalization 1
+    #end if
   </command>
   <inputs>
     <param format="data" type="data" name="xenaInputData" label="Data to import to Xena" optional="false"/>
@@ -112,6 +115,7 @@
         <param type="text" name="label" label="Display Name (Optional)" optional="true"/>
       </when>
     </conditional>
+    <param type="boolean" name="colNormalization" label="Apply Column Normalization" checked="false"/>
   </inputs>
   <outputs>
     <data format="txt" name="outfile"/>