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view seg2matrix/getRefGene_hg18.sh @ 60:bf57076e27b9 default tip

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change genomicSegment input data
author jingchunzhu@gmail.com
date Tue, 27 Oct 2015 16:07:09 -0700
parents ab20c0d04f4a
children
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#!/bin/bash

curl -O http://hgdownload.cse.ucsc.edu/goldenPath/hg18/database/refGene.txt.gz
gunzip -c refGene.txt.gz > refGene_hg18
echo '{ "cgdata" : {"name" : "refGene_hg18", "type" : "genePred", "assembly" : "hg18"} }' > refGene_hg18.json