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view samtools_flagstat/test-data/samtools_flagstat_out1.txt @ 2:40d73baf2363 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools commit f10a2b16814f61326750364c497ad143cac3d137-dirty
author matthias
date Mon, 25 Feb 2019 03:58:49 -0500
parents fe46361a85db
children
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200 + 0 in total (QC-passed reads + QC-failed reads)
0 + 0 secondary
0 + 0 supplementary
0 + 0 duplicates
25 + 0 mapped (12.50% : N/A)
200 + 0 paired in sequencing
100 + 0 read1
100 + 0 read2
0 + 0 properly paired (0.00% : N/A)
0 + 0 with itself and mate mapped
25 + 0 singletons (12.50% : N/A)
0 + 0 with mate mapped to a different chr
0 + 0 with mate mapped to a different chr (mapQ>=5)