Mercurial > repos > matt-shirley > sra_tools

changeset 43:20f463033f80 draft

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conditional output for sam dump
author Matt Shirley <mdshw5@gmail.com>
date Mon, 05 Aug 2013 10:53:43 -0400
parents ed3866e8e3b8
children 2c4599d594a5
files sam_dump.xml
diffstat 1 files changed, 5 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/sam_dump.xml	Mon Aug 05 10:11:15 2013 -0400
+++ b/sam_dump.xml	Mon Aug 05 10:53:43 2013 -0400
@@ -81,7 +81,11 @@
     </param>
   </inputs>
   <outputs>
-    <data format="auto" name="output"/>
+    <data name="output" format="sam">
+      <change_format>
+        <when input="fastq" value="yes" format="fastq"/>
+      </change_format>
+    </data>
   </outputs>
   <requirements>
     <requirement type="package" version="2.3.2-4">sra_toolkit</requirement>