Mercurial > repos > matt-shirley > sra_tools
diff sam_dump.xml @ 11:cdba74ec9eca draft
updated sra_toolkit dependency in <requirements>
author | Matt Shirley <mdshw5@gmail.com> |
---|---|
date | Mon, 17 Jun 2013 14:26:40 -0400 |
parents | ffdd41766195 |
children | 45031bbf6b27 |
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--- a/sam_dump.xml Mon Jun 17 14:22:57 2013 -0400 +++ b/sam_dump.xml Mon Jun 17 14:26:40 2013 -0400 @@ -10,7 +10,7 @@ <option value="--no-header">No</option> </param> <param format="text" name="aligned" type="select" value=""> - <label>Output unaligned reads</label> + <label>Output unaligned reads as well as aligned reads</label> <option value="">No</option> <option value="--unaligned">Yes</option> </param> @@ -24,7 +24,7 @@ <data format="sam" name="output"/> </outputs> <requirements> - <requirement type="binary">sam-dump</requirement> + <requirement type="package" version="2.3.2-4">sra_toolkit</requirement> </requirements> <help> This tool extracts SAM format reads from SRA archives using sam-dump. The sam-dump program is developed at NCBI, and is available at: http://www.ncbi.nlm.nih.gov/Traces/sra/sra.cgi?view=software.