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1 # $Id: NC_Feature.pm,v 1.5 2002/10/22 07:45:20 lapp Exp $
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2 #
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3 # BioPerl module for Bio::SeqFeature::Gene::NC_Feature.pm
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4 #
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5 # Cared for by David Block <dblock@gene.pbi.nrc.ca>
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6 #
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7 # Copyright David Block
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8 #
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9 # You may distribute this module under the same terms as perl itself
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10
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11 # POD documentation - main docs before the code
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12
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13 =head1 NAME
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14
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15 Bio::SeqFeature::Gene::NC_Feature.pm - DESCRIPTION of Object
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16
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17 =head1 SYNOPSIS
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18
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19 Give standard usage here
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20
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21 =head1 DESCRIPTION
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22
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23 Describe the object here
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24
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25 =head1 FEEDBACK
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26
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27 =head2 Mailing Lists
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28
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29 User feedback is an integral part of the evolution of this and other
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30 Bioperl modules. Send your comments and suggestions preferably to
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31 the Bioperl mailing list. Your participation is much appreciated.
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32
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33 bioperl-l@bioperl.org - General discussion
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34 http://bioperl.org/MailList.shtml - About the mailing lists
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35
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36 =head2 Reporting Bugs
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37
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38 Report bugs to the Bioperl bug tracking system to help us keep track
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39 of the bugs and their resolution. Bug reports can be submitted via
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40 email or the web:
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41
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42 bioperl-bugs@bioperl.org
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43 http://bugzilla.bioperl.org/
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44
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45 =head1 AUTHOR - David Block
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46
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47 Email dblock@gnf.org
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48
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49 Describe contact details here
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50
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51 =head1 CONTRIBUTORS
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52
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53 Additional contributors names and emails here
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54
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55 =head1 APPENDIX
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56
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57 The rest of the documentation details each of the object methods.
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58 Internal methods are usually preceded with a _
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59
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60 =cut
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61
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62
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63 # Let the code begin...
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64
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65 package Bio::SeqFeature::Gene::NC_Feature;
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66 use vars qw(@ISA);
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67 use strict;
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68
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69 # Object preamble - inherits from Bio::Root::Root
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70
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71 use Bio::SeqFeature::Generic;
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72
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73 @ISA = qw(Bio::SeqFeature::Generic);
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74 sub new {
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75 my($class,@args) = @_;
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76
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77 my $self = $class->SUPER::new(@args);
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78 }
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79
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80
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81
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82 =head2 is_coding
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83
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84 Title : is_coding
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85 Usage : if ($feature->is_coding()) {
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86 #do something
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87 }
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88 Function: Whether or not the feature codes for amino acid.
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89 Returns : FALSE
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90 Args : none
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91
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92
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93 =cut
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94
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95 sub is_coding {
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96 my ($self,@args) = @_;
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97 return;
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98 }
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99
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100 =head2 cds
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101
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102 Title : cds
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103 Usage : $cds=$feature->cds();
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104 Function: get the coding sequence of this feature
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105 Returns : undef
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106 Args : none
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107
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108
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109 =cut
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110
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111 sub cds {
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112 my ($self,@args) = @_;
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113 return;
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114
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115 }
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116
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117
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118 1;
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