Mercurial > repos > lparsons > htseq_count

diff htseq-count.xml @ 13:256d3114ce31

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Fix input format string and change dependency owners to devteam
author lparsons
date Fri, 11 Apr 2014 13:58:07 -0400
parents c86659f03e98
children c1db55359a86
line wrap: on
line diff
--- a/htseq-count.xml	Fri Apr 11 13:13:37 2014 -0400
+++ b/htseq-count.xml	Fri Apr 11 13:58:07 2014 -0400
@@ -35,7 +35,7 @@
         && samtools view -Su -t ${reference_fasta_filename}.fai $__new_file_path__/${samoutfile.id}_tmp | samtools sort -o - sorted > $samoutfile
     #end if</command>
     <inputs>
-        <param format="sam, bam" name="samfile" type="data" label="Aligned SAM/BAM File"/>
+        <param format="sam,bam" name="samfile" type="data" label="Aligned SAM/BAM File"/>
         <param format="gff" name="gfffile" type="data" label="GFF File"/>
         <param name="mode" type="select" label="Mode">
             <help>Mode to handle reads overlapping more than one feature.</help>