Mercurial > repos > lecorguille > xcms_xcmsset

annotate planemo_test.sh @ 8:9c3e676f7c6c draft

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planemo upload for repository https://github.com/workflow4metabolomics/xcms commit 1bf8810447bdd1268f67bfb64ead95ce82d8d85c
author lecorguille
date Fri, 08 Apr 2016 06:17:34 -0400
parents 60f6c208ca16
children 00ef27ba8abd
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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60f6c208ca16 planemo upload commit a3229faad6949bbca965d1d7e138cb3c0550780e
lecorguille
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1 planemo conda_init
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b9a87af62223 planemo upload commit 5a5b747865d7fb76f711bce2d9ce2a0f82a2a374-dirty
lecorguille
parents:
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2 planemo conda_install .
b9a87af62223 planemo upload commit 5a5b747865d7fb76f711bce2d9ce2a0f82a2a374-dirty
lecorguille
parents:
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3 planemo test --install_galaxy --conda_dependency_resolution --galaxy_branch "dev"
b9a87af62223 planemo upload commit 5a5b747865d7fb76f711bce2d9ce2a0f82a2a374-dirty
lecorguille
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4
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60f6c208ca16 planemo upload commit a3229faad6949bbca965d1d7e138cb3c0550780e
lecorguille
parents: 5
diff changeset
5 #All 2 test(s) executed passed.
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b9a87af62223 planemo upload commit 5a5b747865d7fb76f711bce2d9ce2a0f82a2a374-dirty
lecorguille
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6 #abims_xcms_xcmsSet[0]: passed
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60f6c208ca16 planemo upload commit a3229faad6949bbca965d1d7e138cb3c0550780e
lecorguille
parents: 5
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7 #abims_xcms_xcmsSet[1]: passed
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9c3e676f7c6c planemo upload for repository https://github.com/workflow4metabolomics/xcms commit 1bf8810447bdd1268f67bfb64ead95ce82d8d85c
lecorguille
parents: 6
diff changeset
8
9c3e676f7c6c planemo upload for repository https://github.com/workflow4metabolomics/xcms commit 1bf8810447bdd1268f67bfb64ead95ce82d8d85c
lecorguille
parents: 6
diff changeset
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9c3e676f7c6c planemo upload for repository https://github.com/workflow4metabolomics/xcms commit 1bf8810447bdd1268f67bfb64ead95ce82d8d85c
lecorguille
parents: 6
diff changeset
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9c3e676f7c6c planemo upload for repository https://github.com/workflow4metabolomics/xcms commit 1bf8810447bdd1268f67bfb64ead95ce82d8d85c
lecorguille
parents: 6
diff changeset
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9c3e676f7c6c planemo upload for repository https://github.com/workflow4metabolomics/xcms commit 1bf8810447bdd1268f67bfb64ead95ce82d8d85c
lecorguille
parents: 6
diff changeset
12 source /w/galaxy/dev/shed_tools_tool_dependency_dir/R/3.1.2/iuc/package_r_3_1_2/1ca39eb16186/env.sh
9c3e676f7c6c planemo upload for repository https://github.com/workflow4metabolomics/xcms commit 1bf8810447bdd1268f67bfb64ead95ce82d8d85c
lecorguille
parents: 6
diff changeset
13 source /w/galaxy/dev/shed_tools_tool_dependency_dir/bioconductor-xcms/1.44.0/lecorguille/package_bioconductor_xcms_1_44_0/0c38f7d43e08/env.sh
9c3e676f7c6c planemo upload for repository https://github.com/workflow4metabolomics/xcms commit 1bf8810447bdd1268f67bfb64ead95ce82d8d85c
lecorguille
parents: 6
diff changeset
14 planemo test --install_galaxy --galaxy_branch "dev"
9c3e676f7c6c planemo upload for repository https://github.com/workflow4metabolomics/xcms commit 1bf8810447bdd1268f67bfb64ead95ce82d8d85c
lecorguille
parents: 6
diff changeset
15
9c3e676f7c6c planemo upload for repository https://github.com/workflow4metabolomics/xcms commit 1bf8810447bdd1268f67bfb64ead95ce82d8d85c
lecorguille
parents: 6
diff changeset
16 #All 2 test(s) executed passed.
9c3e676f7c6c planemo upload for repository https://github.com/workflow4metabolomics/xcms commit 1bf8810447bdd1268f67bfb64ead95ce82d8d85c
lecorguille
parents: 6
diff changeset
17 #abims_xcms_xcmsSet[0]: passed
9c3e676f7c6c planemo upload for repository https://github.com/workflow4metabolomics/xcms commit 1bf8810447bdd1268f67bfb64ead95ce82d8d85c
lecorguille
parents: 6
diff changeset
18 #abims_xcms_xcmsSet[1]: passed