Mercurial > repos > lecorguille > xcms_summary

comparison abims_xcms_summary.xml @ 25:3a53e63555c7 draft

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planemo upload for repository https://github.com/workflow4metabolomics/xcms commit 392e432529877680e80a7b338e20d69a42e53767
author lecorguille
date Mon, 03 Apr 2017 07:53:49 -0400
parents abb66f65f1af
children e6a6503d7d6d
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24:5cc59ee748b6 25:3a53e63555c7
55 Description 55 Description
56 ----------- 56 -----------
57 57
58 This tool provide a HTML summary which summarizes your analysis using the [W4M] XCMS and CAMERA tools 58 This tool provide a HTML summary which summarizes your analysis using the [W4M] XCMS and CAMERA tools
59 59
60 -----------------
61 Workflow position
62 -----------------
63
64 **Upstream tools**
65
66 ========================= ================= ===================== ==========
67 Name output file format parameter
68 ========================= ================= ===================== ==========
69 xcms.xcmsSet xset.RData rdata.xcms.raw RData file
70 ------------------------- ----------------- --------------------- ----------
71 xcms.group xset.RData rdata.xcms.group RData file
72 ------------------------- ----------------- --------------------- ----------
73 xcms.retcor xset.RData rdata.xcms.retcor RData file
74 ------------------------- ----------------- --------------------- ----------
75 xcms.fillpeaks xset.RData rdata.xcms.fillpeaks RData file
76 ------------------------- ----------------- --------------------- ----------
77 CAMERA.annotate xset.RData rdata.camera.* RData file
78 ========================= ================= ===================== ==========
79
80
81 .. image:: xcms_merge_workflow.png
60 82
61 --------------------------------------------------- 83 ---------------------------------------------------
62 84
63 Changelog/News 85 Changelog/News
64 -------------- 86 --------------