Mercurial > repos > lecorguille > xcms_retcor

diff abims_xcms_retcor.xml @ 21:51b9f9452794 draft

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planemo upload for repository https://github.com/workflow4metabolomics/xcms commit b274c5c21db1a6ad63c28d425a7a6bce483a4af4
author lecorguille
date Fri, 10 Feb 2017 11:02:38 -0500
parents 8e740205c907
children 411d2b9ea412
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line diff
--- a/abims_xcms_retcor.xml	Thu Feb 09 04:50:45 2017 -0500
+++ b/abims_xcms_retcor.xml	Fri Feb 10 11:02:38 2017 -0500
@@ -11,13 +11,13 @@
 
     <command><![CDATA[
         @COMMAND_XCMS_SCRIPT@
-        image $image
+        image '$image'
         xfunction retcor
 
-        xsetRdataOutput $xsetRData
-        ticspdf $ticsCorPdf
-        bicspdf $bpcsCorPdf
-        rplotspdf $rplotsPdf
+        xsetRdataOutput '$xsetRData'
+        ticspdf '$ticsCorPdf'
+        bicspdf '$bpcsCorPdf'
+        rplotspdf '$rplotsPdf'
 
         method $methods.method
         #if $methods.method == "obiwarp":