Mercurial > repos > lecorguille > xcms_retcor
comparison abims_xcms_retcor.xml @ 21:51b9f9452794 draft
planemo upload for repository https://github.com/workflow4metabolomics/xcms commit b274c5c21db1a6ad63c28d425a7a6bce483a4af4
author | lecorguille |
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date | Fri, 10 Feb 2017 11:02:38 -0500 |
parents | 8e740205c907 |
children | 411d2b9ea412 |
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20:08768644f9c4 | 21:51b9f9452794 |
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9 <expand macro="requirements"/> | 9 <expand macro="requirements"/> |
10 <expand macro="stdio"/> | 10 <expand macro="stdio"/> |
11 | 11 |
12 <command><![CDATA[ | 12 <command><![CDATA[ |
13 @COMMAND_XCMS_SCRIPT@ | 13 @COMMAND_XCMS_SCRIPT@ |
14 image $image | 14 image '$image' |
15 xfunction retcor | 15 xfunction retcor |
16 | 16 |
17 xsetRdataOutput $xsetRData | 17 xsetRdataOutput '$xsetRData' |
18 ticspdf $ticsCorPdf | 18 ticspdf '$ticsCorPdf' |
19 bicspdf $bpcsCorPdf | 19 bicspdf '$bpcsCorPdf' |
20 rplotspdf $rplotsPdf | 20 rplotspdf '$rplotsPdf' |
21 | 21 |
22 method $methods.method | 22 method $methods.method |
23 #if $methods.method == "obiwarp": | 23 #if $methods.method == "obiwarp": |
24 profStep $methods.profStep | 24 profStep $methods.profStep |
25 #else | 25 #else |