diff xcms_merge.r @ 24:bf452dc6e4b0 draft

planemo upload for repository https://github.com/workflow4metabolomics/tools-metabolomics/ commit eca29d4347fe2f4802091c4a06715232a6fd9253

--- a/xcms_merge.r	Wed Apr 07 10:30:24 2021 +0000
+++ b/xcms_merge.r	Mon Jul 15 15:53:20 2024 +0000
@@ -2,13 +2,15 @@
 
 #Import the different functions
 source_local <- function(fname) {
-  argv <- commandArgs(trailingOnly = FALSE); base_dir <- dirname(substring(argv[grep("--file=", argv)], 8)); source(paste(base_dir, fname, sep = "/"))
+  argv <- commandArgs(trailingOnly = FALSE)
+  base_dir <- dirname(substring(argv[grep("--file=", argv)], 8))
+  source(paste(base_dir, fname, sep = "/"))
 }
 source_local("lib.r")
 
 pkgs <- c("xcms", "batch")
 loadAndDisplayPackages(pkgs)
-cat("\n\n");
+cat("\n\n")
 
 args <- parseCommandArgs(evaluate = FALSE) #interpretation of arguments given in command line as an R list of objects