Mercurial > repos > lecorguille > xcms_group
changeset 24:1a7d1f9e8912 draft
planemo upload for repository https://github.com/workflow4metabolomics/xcms commit b8ea02b3d37550c33dcf8e099fe8c636287b0865
| author | lecorguille |
|---|---|
| date | Fri, 31 Mar 2017 07:24:54 -0400 |
| parents | dcff3c4a8c80 |
| children | 4bd8cd773b4e |
| files | abims_xcms_group.xml macros.xml |
| diffstat | 2 files changed, 4 insertions(+), 4 deletions(-) [+] |
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--- a/abims_xcms_group.xml Thu Mar 30 08:34:09 2017 -0400 +++ b/abims_xcms_group.xml Fri Mar 31 07:24:54 2017 -0400 @@ -98,7 +98,7 @@ <outputs> <data name="xsetRData" format="rdata.xcms.group" label="${image.name[:-6]}.group.RData"/> <data name="rplotsPdf" format="pdf" label="${image.name[:-6]}.group.Rplots.pdf"/> - <expand macro="output_peaklist"/> + <expand macro="output_peaklist" function="group"/> <data name="log" format="txt" label="xset.log.txt" hidden="true" /> </outputs>
--- a/macros.xml Thu Mar 30 08:34:09 2017 -0400 +++ b/macros.xml Fri Mar 31 07:24:54 2017 -0400 @@ -107,11 +107,11 @@ </conditional> </xml> - <xml name="output_peaklist"> - <data name="variableMetadata" format="tabular" label="${image.name[:-6]}.fillPeaks.variableMetadata.tsv"> + <xml name="output_peaklist" token_function=""> + <data name="variableMetadata" format="tabular" label="${image.name[:-6]}.@FUNCTION@.variableMetadata.tsv"> <filter>(peaklist['peaklistBool'])</filter> </data> - <data name="dataMatrix" format="tabular" label="${image.name[:-6]}.fillPeaks.dataMatrix.tsv" > + <data name="dataMatrix" format="tabular" label="${image.name[:-6]}.@FUNCTION@.dataMatrix.tsv" > <filter>(peaklist['peaklistBool'])</filter> </data> </xml>