Mercurial > repos > lecorguille > xcms_fillpeaks

diff abims_xcms_fillPeaks.xml @ 23:7e289788d37d draft

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planemo upload for repository https://github.com/workflow4metabolomics/xcms commit 87dc789d7cd70a3733a1ad0b5a427f4d5905795d
author lecorguille
date Wed, 01 Mar 2017 16:58:07 -0500
parents a6938c381d4e
children 0544bc5967ed
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--- a/abims_xcms_fillPeaks.xml	Fri Feb 10 11:03:13 2017 -0500
+++ b/abims_xcms_fillPeaks.xml	Wed Mar 01 16:58:07 2017 -0500
@@ -35,7 +35,7 @@
 
         <expand macro="input_peaklist"/>
 
-        <expand macro="file_load"/>
+        <expand macro="input_file_load"/>
 
     </inputs>
 
@@ -70,9 +70,7 @@
                 <param name="numDigitsMZ" value="4" />
                 <param name="numDigitsRT" value="1" />
             </conditional>
-            <param name="file_load_conditional|file_load_select" value="yes" />
-            <param name="file_load_conditional|inputs|input" value="zip_file" />
-            <param name="file_load_conditional|inputs|zip_file" value="faahKO_reduce.zip"  ftype="zip" />
+            <expand macro="test_file_load_zip"/>
             <output name="log">
                 <assert_contents>
                     <has_text text="object with 4 samples" />
@@ -95,9 +93,7 @@
                 <param name="numDigitsMZ" value="4" />
                 <param name="numDigitsRT" value="1" />
             </conditional>
-            <param name="file_load_conditional|file_load_select" value="yes" />
-            <param name="file_load_conditional|inputs|input" value="single_file" />
-            <param name="file_load_conditional|inputs|single_file" value="wt15.CDF,ko16.CDF,ko15.CDF,wt16.CDF"  ftype="netcdf" />
+            <expand macro="test_file_load_single"/>
             <output name="log">
                 <assert_contents>
                     <has_text text="object with 4 samples" />