Mercurial > repos > lecorguille > camera_annotate

annotate README.rst @ 18:85b8351ded6c draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload commit a57205d251bdebafdee164225fd03ac4d821e49c-dirty
author lecorguille
date Wed, 06 Jul 2016 17:28:55 -0400
parents 77a191e37af4
children 2a4a811c663d
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
7
c4600fa6c713 Uploaded
lecorguille
parents:
diff changeset
1
c4600fa6c713 Uploaded
lecorguille
parents:
diff changeset
2 Changelog/News
c4600fa6c713 Uploaded
lecorguille
parents:
diff changeset
3 --------------
c4600fa6c713 Uploaded
lecorguille
parents:
diff changeset
4
18
85b8351ded6c planemo upload commit a57205d251bdebafdee164225fd03ac4d821e49c-dirty
lecorguille
parents: 15
diff changeset
5 **Version 2.1.6 - 06/07/2016**
85b8351ded6c planemo upload commit a57205d251bdebafdee164225fd03ac4d821e49c-dirty
lecorguille
parents: 15
diff changeset
6
85b8351ded6c planemo upload commit a57205d251bdebafdee164225fd03ac4d821e49c-dirty
lecorguille
parents: 15
diff changeset
7 - IMPROVEMENT: add the possibility to use defined ruleset
85b8351ded6c planemo upload commit a57205d251bdebafdee164225fd03ac4d821e49c-dirty
lecorguille
parents: 15
diff changeset
8
14
e98ca7f0dcbd planemo upload commit 2761472c8afc41d54cecd54cabd1c5a5713514a3-dirty
lecorguille
parents: 7
diff changeset
9 **Version 2.1.5 - 21/04/2016**
e98ca7f0dcbd planemo upload commit 2761472c8afc41d54cecd54cabd1c5a5713514a3-dirty
lecorguille
parents: 7
diff changeset
10
e98ca7f0dcbd planemo upload commit 2761472c8afc41d54cecd54cabd1c5a5713514a3-dirty
lecorguille
parents: 7
diff changeset
11 - UPGRADE: upgrate the CAMERA version from 1.22.0 to 1.26.0
e98ca7f0dcbd planemo upload commit 2761472c8afc41d54cecd54cabd1c5a5713514a3-dirty
lecorguille
parents: 7
diff changeset
12
e98ca7f0dcbd planemo upload commit 2761472c8afc41d54cecd54cabd1c5a5713514a3-dirty
lecorguille
parents: 7
diff changeset
13
e98ca7f0dcbd planemo upload commit 2761472c8afc41d54cecd54cabd1c5a5713514a3-dirty
lecorguille
parents: 7
diff changeset
14 **Version 2.1.4 - 18/04/2016**
e98ca7f0dcbd planemo upload commit 2761472c8afc41d54cecd54cabd1c5a5713514a3-dirty
lecorguille
parents: 7
diff changeset
15
e98ca7f0dcbd planemo upload commit 2761472c8afc41d54cecd54cabd1c5a5713514a3-dirty
lecorguille
parents: 7
diff changeset
16 - TEST: refactoring to pass planemo test using conda dependencies
e98ca7f0dcbd planemo upload commit 2761472c8afc41d54cecd54cabd1c5a5713514a3-dirty
lecorguille
parents: 7
diff changeset
17
e98ca7f0dcbd planemo upload commit 2761472c8afc41d54cecd54cabd1c5a5713514a3-dirty
lecorguille
parents: 7
diff changeset
18 **Version 2.1.3 - 10/02/2016**
7
c4600fa6c713 Uploaded
lecorguille
parents:
diff changeset
19
c4600fa6c713 Uploaded
lecorguille
parents:
diff changeset
20 - BUGFIX: better management of errors. Datasets remained green although the process failed
c4600fa6c713 Uploaded
lecorguille
parents:
diff changeset
21
c4600fa6c713 Uploaded
lecorguille
parents:
diff changeset
22 - BUGFIX: the conversion into minutes of the retention time was applied to the diffreport outputs (several conditions)
c4600fa6c713 Uploaded
lecorguille
parents:
diff changeset
23
c4600fa6c713 Uploaded
lecorguille
parents:
diff changeset
24 - IMPROVEMENT: when there are several conditions, the tool will generate individual datasets (tsv, pdf) instead of a zip file. The usual png (eic, boxplot) will from now be integrated in two pdf.
c4600fa6c713 Uploaded
lecorguille
parents:
diff changeset
25
c4600fa6c713 Uploaded
lecorguille
parents:
diff changeset
26 - UPDATE: refactoring of internal management of inputs/outputs
c4600fa6c713 Uploaded
lecorguille
parents:
diff changeset
27
c4600fa6c713 Uploaded
lecorguille
parents:
diff changeset
28
c4600fa6c713 Uploaded
lecorguille
parents:
diff changeset
29 VERSION 2.1.0 - 09/10/2015**
c4600fa6c713 Uploaded
lecorguille
parents:
diff changeset
30
c4600fa6c713 Uploaded
lecorguille
parents:
diff changeset
31 - BUGFIX: There was a bug with the CAMERA.annotate (generating a bad dataMatrix (intensities which don't match with the metabolites))
c4600fa6c713 Uploaded
lecorguille
parents:
diff changeset
32
c4600fa6c713 Uploaded
lecorguille
parents:
diff changeset
33
c4600fa6c713 Uploaded
lecorguille
parents:
diff changeset
34 VERSION 2.1.0 - 07/06/2015**
c4600fa6c713 Uploaded
lecorguille
parents:
diff changeset
35
c4600fa6c713 Uploaded
lecorguille
parents:
diff changeset
36 - IMPROVEMENT: new datatype/dataset formats (rdata.camera.positive, rdata.camera.negative, rdata.camera.quick ...) will facilitate the sequence of tools and so avoid incompatibility errors.
c4600fa6c713 Uploaded
lecorguille
parents:
diff changeset
37
c4600fa6c713 Uploaded
lecorguille
parents:
diff changeset
38 - IMPROVEMENT: parameter labels have changed to facilitate their reading.
c4600fa6c713 Uploaded
lecorguille
parents:
diff changeset
39
c4600fa6c713 Uploaded
lecorguille
parents:
diff changeset
40 - UPDATE: merged with annotateDiffreport. Some parameters are dedicated to experiences with several conditions
c4600fa6c713 Uploaded
lecorguille
parents:
diff changeset
41
c4600fa6c713 Uploaded
lecorguille
parents:
diff changeset
42
14
e98ca7f0dcbd planemo upload commit 2761472c8afc41d54cecd54cabd1c5a5713514a3-dirty
lecorguille
parents: 7
diff changeset
43
e98ca7f0dcbd planemo upload commit 2761472c8afc41d54cecd54cabd1c5a5713514a3-dirty
lecorguille
parents: 7
diff changeset
44 Test Status
e98ca7f0dcbd planemo upload commit 2761472c8afc41d54cecd54cabd1c5a5713514a3-dirty
lecorguille
parents: 7
diff changeset
45 -----------
e98ca7f0dcbd planemo upload commit 2761472c8afc41d54cecd54cabd1c5a5713514a3-dirty
lecorguille
parents: 7
diff changeset
46
15
77a191e37af4 planemo upload commit 9d47e3b467dbbe0af0d90a937c5e9f2c4b958c4b
lecorguille
parents: 14
diff changeset
47 Planemo test using conda: passed
14
e98ca7f0dcbd planemo upload commit 2761472c8afc41d54cecd54cabd1c5a5713514a3-dirty
lecorguille
parents: 7
diff changeset
48
e98ca7f0dcbd planemo upload commit 2761472c8afc41d54cecd54cabd1c5a5713514a3-dirty
lecorguille
parents: 7
diff changeset
49 Planemo test using source env.sh: passed
e98ca7f0dcbd planemo upload commit 2761472c8afc41d54cecd54cabd1c5a5713514a3-dirty
lecorguille
parents: 7
diff changeset
50
e98ca7f0dcbd planemo upload commit 2761472c8afc41d54cecd54cabd1c5a5713514a3-dirty
lecorguille
parents: 7
diff changeset
51 Planemo shed_test : passed