Mercurial > repos > lecorguille > camera_annotate

annotate README.rst @ 25:230f0bc9e792 draft

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author lecorguille
date Fri, 10 Feb 2017 11:11:27 -0500
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2 Changelog/News
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3 --------------
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5 **Version 2.2.0 - 03/02/2017**
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7 - BUGFIX: the diffreport ids didn't convert the rt in minute as the other export
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9 - UPDATE: the settings (digits, convertion in minutes) of the identifiants will no longer modify the native one. Because we want to be conservative and because it can be dangerous for the data integrity during a futur merge of the table, we decide to put those customization in a new column namecustom within the variableMetadata.
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11 - IMPROVEMENT: add the possibility to set the MZ digit within the identifiants
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13 - IMPROVEMENT: add the possibility to use defined ruleset
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15 - IMPROVEMENT: CAMERA.annotate is now compatible with merged individual data from xcms.xcmsSet
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18 **Version 2.1.5 - 21/04/2016**
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20 - UPGRADE: upgrate the CAMERA version from 1.22.0 to 1.26.0
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23 **Version 2.1.4 - 18/04/2016**
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25 - TEST: refactoring to pass planemo test using conda dependencies
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27 **Version 2.1.3 - 10/02/2016**
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29 - BUGFIX: better management of errors. Datasets remained green although the process failed
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31 - BUGFIX: the conversion into minutes of the retention time was applied to the diffreport outputs (several conditions)
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33 - IMPROVEMENT: when there are several conditions, the tool will generate individual datasets (tsv, pdf) instead of a zip file. The usual png (eic, boxplot) will from now be integrated in two pdf.
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35 - UPDATE: refactoring of internal management of inputs/outputs
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38 VERSION 2.1.0 - 09/10/2015**
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40 - BUGFIX: There was a bug with the CAMERA.annotate (generating a bad dataMatrix (intensities which don't match with the metabolites))
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43 VERSION 2.1.0 - 07/06/2015**
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45 - IMPROVEMENT: new datatype/dataset formats (rdata.camera.positive, rdata.camera.negative, rdata.camera.quick ...) will facilitate the sequence of tools and so avoid incompatibility errors.
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47 - IMPROVEMENT: parameter labels have changed to facilitate their reading.
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49 - UPDATE: merged with annotateDiffreport. Some parameters are dedicated to experiences with several conditions