diff somewrapper.xml @ 0:959a0e30d6c1 draft default tip

Uploaded

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/somewrapper.xml	Sat Jan 19 21:51:49 2013 -0500
@@ -0,0 +1,19 @@
+<tool id="some_wrapper" name="diffbind" version="0.0.1">
+  <requirements>
+    <requirement type="set_environment">SOMEWRAPPER_R_SCRIPT_PATH</requirement>
+    <requirement type="package" version="2.15.1">R</requirement>
+  </requirements>
+  <command interpreter="python"> 
+    somewrapper.py Rscript \$SOMEWRAPPER_R_SCRIPT_PATH/somewrapper.r &gt; ${some_out}
+  </command>
+  <inputs>
+    <param format="txt" name="input_file" type="data" label="some input" />
+  </inputs>
+  <outputs>
+    <!--<data format="html" name="html_outfile" label="index" />-->
+    <!--<data format="html" hidden="True" name="html_outfile" label="index.html" />-->
+    <data format="txt" name="some_out" label="S{tool.name} on #echo os.path.splitext(str($input_file.name))[0]#.zip" />
+  </outputs>
+  <help>
+  </help>
+</tool>