Mercurial > repos > kevyin > fastq_groomer_parallel

Copyright (c) 2012, Kenneth Sabir
All rights reserved.

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Installation:
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Set the number of threads to use edit fastq_groomer_parallel.xml:
Modify the last argument in the <command> tag, Default is 2


Tested on -r e6444e7a1685
This currently depends on the following galaxy_utils python library which should come with the default galaxy install

More info:
    from galaxy_utils.sequence.fastq import fastqReader, fastqVerboseErrorReader, fastqAggregator, fastqWriter
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author	kevyin
date	Thu, 13 Sep 2012 22:01:55 -0400
parents
children	cc357aad2022