Mercurial > repos > jorrit > obotools
diff tool_dependencies.xml @ 8:00a5ede354a0
Uploaded
author | jorrit |
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date | Tue, 26 Feb 2013 17:45:58 -0500 |
parents | ebf2b433a239 |
children | aebf24eea338 |
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--- a/tool_dependencies.xml Tue Feb 19 18:16:12 2013 -0500 +++ b/tool_dependencies.xml Tue Feb 26 17:45:58 2013 -0500 @@ -1,20 +1,37 @@ <?xml version="1.0"?> <tool_dependency> + <package name="ontologizer" version="0.0.1"> + <install version="1.0"> + <actions> + <action type="shell_command">curl http://compbio.charite.de/contao/index.php/cmdlineOntologizer.html?file=tl_files/ontologizer/cmdline/Ontologizer.jar > ontologizer.jar</action> + <action type="move_directory_files"> + <source_directory>./</source_directory> + <destination_directory>$INSTALL_DIR</destination_directory> + </action> + <action type="set_environment"> + <environment_variable name="ONTOLOGIZER_JAR">$INSTALL_DIR/ontologizer.jar</environment_variable> + </action> + </actions> + </install> + <readme> + ontologizer requires java and curl to be installed. + </readme> + </package> <package name="obo-scripts" version="1.0.12"> <install version="1.0"> <actions> <action type="shell_command">git clone http://github.com/cmungall/obo-scripts</action> - <action type="move_directory_files"> + <action type="move_directory_files"> <source_directory>./</source_directory> <destination_directory>$INSTALL_DIR</destination_directory> </action> - <action type="set_environment"> + <action type="set_environment"> <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable> </action> </actions> </install> <readme> - obo_scripts require perl to be installed. - </readme> - </package> + obo_scripts require perl to be installed. + </readme> + </package> </tool_dependency>