Mercurial > repos > jjohnson > translate_bed_sequences

comparison translate_bed_sequences.xml @ 2:359addb9b9d4

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Do not include the stop codon when filtering
author Jim Johnson <jj@umn.edu>
date Thu, 09 Jan 2014 14:24:41 -0600
parents 639ee511d552
children 3b526a780849
comparison
equal deleted inserted replaced
1:639ee511d552 2:359addb9b9d4
27 #else: 27 #else:
28 --unfiltered 28 --unfiltered
29 #end if 29 #end if
30 #if $trim.trimseqs == 'no': 30 #if $trim.trimseqs == 'no':
31 --untrimmed 31 --untrimmed
32 #if $trim.max_stop_codons != None: 32 #if $trim.max_stop_codons.__str__ != '':
33 --max_stop_codons $trim.max_stop_codons 33 --max_stop_codons $trim.max_stop_codons
34 #end if 34 #end if
35 #end if 35 #end if
36 #if $min_length: 36 #if $min_length:
37 --min_length $min_length 37 --min_length $min_length