Mercurial > repos > jjohnson > translate_bed_sequences

diff translate_bed_sequences.xml @ 2:359addb9b9d4

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Do not include the stop codon when filtering
author Jim Johnson <jj@umn.edu>
date Thu, 09 Jan 2014 14:24:41 -0600
parents 639ee511d552
children 3b526a780849
line wrap: on
line diff
--- a/translate_bed_sequences.xml	Thu Jan 09 09:47:50 2014 -0600
+++ b/translate_bed_sequences.xml	Thu Jan 09 14:24:41 2014 -0600
@@ -29,7 +29,7 @@
   #end if
   #if $trim.trimseqs == 'no':
     --untrimmed
-    #if $trim.max_stop_codons != None:
+    #if $trim.max_stop_codons.__str__ != '':
       --max_stop_codons $trim.max_stop_codons
     #end if
   #end if