Mercurial > repos > jjohnson > suite_bcftools_1_3

changeset 1:b2b927669da4 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 21c66fb27c7e2fd21c7f7607b3b29e77e64fb86d-dirty
author jjohnson
date Sun, 26 Jun 2016 15:45:18 -0400
parents 75dc9d62c178
children
files repository_dependencies.xml
diffstat 1 files changed, 30 insertions(+), 31 deletions(-) [+]
line wrap: on
line diff
--- a/repository_dependencies.xml	Sat Jun 25 20:53:40 2016 -0400
+++ b/repository_dependencies.xml	Sun Jun 26 15:45:18 2016 -0400
@@ -1,33 +1,32 @@
 <?xml version="1.0"?>
-<repositories description="A suite of Galaxy tools designed to work with version 1.3 of the bcftools package.">  <repository changeset_revision="a30804010531" name="bcftools_annotate" owner="jjohnson" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="20b3aaa16d64" name="bcftools_call" owner="jjohnson" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="b50e0b926cde" name="bcftools_cnv" owner="jjohnson" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="2f9528a8e6b8" name="bcftools_concat" owner="jjohnson" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="1c55de3bf217" name="bcftools_consensus" owner="jjohnson" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="d396503fdbdb" name="bcftools_convert_from_vcf" owner="jjohnson" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="bca07db8f55c" name="bcftools_convert_to_vcf" owner="jjohnson" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="442f9d982db3" name="bcftools_filter" owner="jjohnson" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="29cb1ed96854" name="bcftools_gtcheck" owner="jjohnson" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="a9b2784bb38a" name="bcftools_isec" owner="jjohnson" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="25287fefea50" name="bcftools_merge" owner="jjohnson" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="6a53c22dc158" name="bcftools_norm" owner="jjohnson" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="dc7c973f8e32" name="bcftools_plugin_color_chrs" owner="jjohnson" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="17b407921818" name="bcftools_plugin_counts" owner="jjohnson" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="416eb99f7ba4" name="bcftools_plugin_dosage" owner="jjohnson" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="e1277c44ebd5" name="bcftools_plugin_fill_an_ac" owner="jjohnson" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="0ed41f57cf27" name="bcftools_plugin_fill_tags" owner="jjohnson" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="f0520447da4d" name="bcftools_plugin_fixploidy" owner="jjohnson" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="53bf140c7d55" name="bcftools_plugin_frameshifts" owner="jjohnson" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="8dcc53e60847" name="bcftools_plugin_impute_info" owner="jjohnson" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="7b5c5cab79e1" name="bcftools_plugin_mendelian" owner="jjohnson" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="ff65d6e0809b" name="bcftools_plugin_missing2ref" owner="jjohnson" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="28c189385d7e" name="bcftools_plugin_setgt" owner="jjohnson" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="3b1375d40475" name="bcftools_plugin_tag2tag" owner="jjohnson" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="255f41136132" name="bcftools_plugin_vcf2sex" owner="jjohnson" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="bfea7fe50fd0" name="bcftools_query" owner="jjohnson" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="04df584fe152" name="bcftools_query_list_samples" owner="jjohnson" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="4a6d130d8eb8" name="bcftools_reheader" owner="jjohnson" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="ee03050edc3d" name="bcftools_roh" owner="jjohnson" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="b2f7a15398b4" name="bcftools_stats" owner="jjohnson" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="7fa689e447ba" name="bcftools_view" owner="jjohnson" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+<repositories description="A suite of Galaxy tools designed to work with version 1.3 of the bcftools package.">  <repository changeset_revision="6c6a06ac35c1" name="bcftools_annotate" owner="jjohnson" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="1a4307fecd78" name="bcftools_call" owner="jjohnson" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="97f1bf117fd5" name="bcftools_cnv" owner="jjohnson" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="24e514e7abe0" name="bcftools_concat" owner="jjohnson" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="00c4dab57376" name="bcftools_convert_from_vcf" owner="jjohnson" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="7de527c01731" name="bcftools_convert_to_vcf" owner="jjohnson" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="201536a80600" name="bcftools_filter" owner="jjohnson" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="3b6743fcdab3" name="bcftools_gtcheck" owner="jjohnson" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="a669c348a63d" name="bcftools_isec" owner="jjohnson" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="f849e5eb85a9" name="bcftools_merge" owner="jjohnson" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="5b2b2ab582cc" name="bcftools_norm" owner="jjohnson" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="60f693d36cb0" name="bcftools_plugin_color_chrs" owner="jjohnson" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="10a816171849" name="bcftools_plugin_counts" owner="jjohnson" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="e3aa7eba224b" name="bcftools_plugin_dosage" owner="jjohnson" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="ea55db329d1a" name="bcftools_plugin_fill_an_ac" owner="jjohnson" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="ccd6441a80e0" name="bcftools_plugin_fill_tags" owner="jjohnson" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="e109bcf84b30" name="bcftools_plugin_fixploidy" owner="jjohnson" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="eb0cb4a5f478" name="bcftools_plugin_frameshifts" owner="jjohnson" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="f125988aa89e" name="bcftools_plugin_impute_info" owner="jjohnson" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="3fc65f0b812d" name="bcftools_plugin_mendelian" owner="jjohnson" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="1ac5da7f24c9" name="bcftools_plugin_missing2ref" owner="jjohnson" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="d592de4029b0" name="bcftools_plugin_setgt" owner="jjohnson" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="8d9e831632af" name="bcftools_plugin_tag2tag" owner="jjohnson" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="d661b912ab10" name="bcftools_plugin_vcf2sex" owner="jjohnson" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="1610708580c3" name="bcftools_query" owner="jjohnson" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="8da29bdd7e0a" name="bcftools_query_list_samples" owner="jjohnson" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="c547813e234e" name="bcftools_reheader" owner="jjohnson" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="357ef9b26247" name="bcftools_roh" owner="jjohnson" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="d541f5c15870" name="bcftools_stats" owner="jjohnson" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="e278f064cf23" name="bcftools_view" owner="jjohnson" toolshed="https://testtoolshed.g2.bx.psu.edu" />
 </repositories>