Mercurial > repos > jjohnson > spectrast2spectrast_irt

changeset 1:dc40297705fc draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/spectrast2spectrast_irt commit 616f0282d3a3e0b433c324e899bea7b0dcd3d7e0-dirty
author jjohnson
date Thu, 26 Jul 2018 10:53:48 -0400
parents 90dcbb52c83a
children f5ca880950f7
files jnk spectrast2spectrast_irt.xml
diffstat 2 files changed, 114 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/jnk	Thu Jul 26 10:53:48 2018 -0400
@@ -0,0 +1,113 @@
+ADTLDPALLRPGR:35.987015
+AFEEAEK:-21.35736
+AFLIEEQK:22.8
+AGFAGDDAPR:-9.819255
+AGLQFPVGR:37.04898
+AILGSVER:5.415375
+APGFGDNR:-15.63474
+AQIWDTAGQER:16.854875
+ATAGDTHLGGEDFDNR:3.185526667
+ATIGADFLTK:43.837285
+AVANQTSATFLR:19.24765
+AVFPSIVGRPR:34.03497
+C[160]ATITPDEAR:-10.13943
+DAGTIAGLNVLR:59.03744667
+DAHQSLLATR:-3.25497
+DELTLEGIK:39.132035
+DLMAC[160]AQTGSGK:0.306955
+DLTDYLMK:60.01111111
+DNIQGITKPAIR:12.598125
+DNTGYDLK:-9.39721
+DSTLIMQLLR:103.65
+DSYVGDEAQSK:-15.509125
+DVQEIFR:29.61571
+DWNVDLIPK:70.53546
+EAYPGDVFYLHSR:46.35
+EC[160]ADLWPR:28.711905
+EDAANNYAR:-23.23042
+EGIPPDQQR:-15.8411
+EHAALEPR:-22.61094
+EIAQDFK:-4.04913
+EIQTAVR:-17.07064
+ELIIGDR:11.56179
+ELISNASDALDK:23.50069
+EMVELPLR:47.96546
+ESTLHLVLR:28.54494
+EVDIGIPDATGR:37.10299
+FDDGAGGDNEVQR:-11.31703
+FDLMYAK:38.2
+FDNLYGC[160]R:9.6064
+FEELC[160]ADLFR:73.5
+FELSGIPPAPR:52.5
+FELTGIPPAPR:53.1
+FPFAANSR:18.76225
+FQSLGVAFYR:60.2276
+FTQAGSEVSALLGR:61.450335
+FTVDLPK:37.86026
+FVIGGPQGDAGLTGR:40.551975
+GC[160]EVVVSGK:-15.49014
+GEEILSGAQR:-1.811165
+GILFVGSGVSGGEEGAR:51.15
+GILLYGPPGTGK:45.36582
+GIRPAINVGLSVSR:37.98295
+GNHEC[160]ASINR:-23.57003
+GVC[160]TEAGMYALR:31.20584
+GVLLYGPPGTGK:28.11667
+GVLMYGPPGTGK:28.20674
+HFSVEGQLEFR:41.108635
+HITIFSPEGR:22.39813
+HLQLAIR:9.42694
+HLTGEFEK:-13.72484
+HVFGQAAK:-24.54245
+IC[160]DFGLAR:28.009545
+IC[160]GDIHGQYYDLLR:50.34788
+IETLDPALIRPGR:43.43414
+IGGIGTVPVGR:21.9
+IGLFGGAGVGK:43.285185
+IGPLGLSPK:29.48313
+IHETNLK:-25.53888
+IINEPTAAAIAYGLDK:65.72006667
+IYGFYDEC[160]K:31.695135
+KPLLESGTLGTK:9.057185
+LAEQAER:-25.089125
+LGANSLLDLVVFGR:134.00759
+LIEDFLAR:56.93148
+LILIESR:28.145215
+LPLQDVYK:29.2
+LQIWDTAGQER:36.28872
+LVIVGDGAC[160]GK:10.8
+LVLVGDGGTGK:12.022895
+LYQVEYAFK:46.26582
+MLSC[160]AGADR:-15.49156
+NILGGTVFR:49.61455
+NIVEAAAVR:5.73971
+NLLSVAYK:34.34229
+NLQYYDISAK:25.8
+NMSVIAHVDHGK:-5.36295
+QAVDVSPLR:11.34271
+QTVAVGVIK:9.9
+SAPSTGGVK:-27.56682
+SGQGAFGNMC[160]R:0.790505
+SNYNFEKPFLWLAR:96.01717
+STELLIR:18.1
+STTTGHLIYK:-9.48751
+SYELPDGQVITIGNER:67.30002
+TIAMDGTEGLVR:32.822885
+TIVMGASFR:29.53023
+TLSDYNIQK:4.35
+TTIFSPEGR:15.183785
+TTPSYVAFTDTER:33.79824667
+TTVEYLIK:30.16799
+VAVVAGYGDVGK:15.331395
+VC[160]ENIPIVLC[160]GNK:49.065875
+VLPSIVNEVLK:83.750085
+VPAINVNDSVTK:17.70942
+VSTEVDAR:-20.136945
+VVPGYGHAVLR:8.61752
+WPFWLSPR:98.382385
+YAWVLDK:41.6
+YDSTHGR:-57.05955
+YFPTQALNFAFK:95.4
+YLVLDEADR:27.6947
+YPIEHGIVTNWDDMEK:56.9
+YTQSNSVC[160]YAK:-12.794935
--- a/spectrast2spectrast_irt.xml	Wed Jul 25 16:45:58 2018 -0400
+++ b/spectrast2spectrast_irt.xml	Thu Jul 26 10:53:48 2018 -0400
@@ -16,7 +16,7 @@
         ## may have to link splib
         mkdir -p outdir &&
         spectrast2spectrast_irt.py
-            --in ${input.extra_file_path}/library.sptxt
+            --in ${input.extra_files_path}/library.sptxt
             --out outdir/library.splib
             #if str($kit) != 'None':
                 --kit "#echo ",".join(str($kit).split(','))#"