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diff shear_sv.xml @ 10:2620f7984418

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Update to shear version 0.2.5
author Jim Johnson <jj@umn.edu>
date Fri, 08 Nov 2013 09:21:17 -0600
parents 03071ff2e5c9
children
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--- a/shear_sv.xml	Tue Oct 22 09:55:49 2013 -0500
+++ b/shear_sv.xml	Fri Nov 08 09:21:17 2013 -0600
@@ -1,12 +1,12 @@
 <?xml version="1.0"?>
-<tool id="shear_sv" name="SHEAR-SV" version="0.0.3">
+<tool id="shear_sv" name="SHEAR-SV" version="0.0.5">
   <description>find SVs and estimate the heterogeneity levels from a BAM</description>
   <requirements>
-    <requirement type="package" version="0.2.4">shear</requirement>
+    <requirement type="package" version="0.2.5">shear</requirement>
     <requirement type="package" version="0.1.18">samtools</requirement>
     <requirement type="package" version="0.6.2">bwa</requirement>
     <requirement type="package" version="1.0.1">crest</requirement>
-    <requirement type="package" version="latest">kent</requirement>
+    <requirement type="package" version="latest">blat_server</requirement>
     <requirement type="package" version="3">cap3</requirement>
   </requirements>
   <!--