view test-data/trimmed_sequences.fastq @ 1:b0276d1141fe default tip

Fix test case
author Jim Johnson <jj@umn.edu>
date Thu, 30 Jan 2014 13:10:12 -0600
parents 08439b004404
children
line wrap: on
line source

@SOLEXA2_0414:3:1:11146:1065#0/1 
N
+
B
@SOLEXA2_0414:3:1:12658:1069#0/1 
NCTACATACAGTTGTAAGGTCTGGTTTGTCCTAGGCAGAGGACACTGCGGGAGATTCAGAGTATGTAGCA
+
BOIOKPTTTT_________________________________________________TYYYYY_____
@SOLEXA2_0414:3:1:17191:1069#0/1 
NAGCAATCTATAGTTTGTGTATTGCCAAGTCTGTTGTGAGCCCTTC
+
BBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBB
@SOLEXA2_0414:3:1:6993:1073#0/1 
NTGGATCTCCCGCAGTGTCCTAAATGGACAAACCAGACCTTACAACTGTTACTCTGAATCTCCCGCAGTGTCCTCTGCCTAGGAC
+
BJJJJVVVWVb__bb______bb________________b__________Y[[[[b__b__bb__YYYYY_______________
@SOLEXA2_0414:3:1:10702:1075#0/1 
NCTACATTACTCTGAATCTCCCGCAGTGTCCAGGACAAACCAGACCTTACGACTGTTACTCTGAATCTCCCGCAGTGTCCTCTGC
+
BIHKIQTQTQ[[[YPVTVVVWWWWVRRPRTVPTTTVVVTTVTVTVVVVVTTVVVVRRPLRTQTJQ_____YYVYYVVTNVXWWVW
@SOLEXA2_0414:3:1:12096:1078#0/1 
NTGCGATTACTCTGAATCTCCCGCAGTGTCCAATACTGTACTTTTTTACATAGTCATTGCTTAATGAATATGTATTGAATTAAAT
+
BEKEEJOHHHTTVVV_____[[Y[[WWVXXXVXXWRRPTTWXXXWWQQWXWWWTWKKLLLLLLHRVTVVNTTVVT_____YWYYY
@SOLEXA2_0414:3:1:12624:1071#0/1 
NTGCGATAGTGTCCTGTGTGCCCCTGCACATGCCTGTGGCTTCCCGGGCTTCTGACCACATCCCCACCATCTTTGTGC
+
BQLLMTTTTT__________YYYYY________b___________BBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBB
@SOLEXA2_0414:3:1:13769:1080#0/1 
NAGCAATCTAAAACCCAAAGTATATAAGAAGGGTATGGTTGATTATGTTTTTCTACATATTATTTGACATACTTCTATCTTCCCA
+
BPPPPXXXXX_b_b_b_bbb_b___YYYYYWXXXXWWWWW_b__b_____QQQQQb_b_b_b_bQQZ___b_b____________
@SOLEXA2_0414:3:1:13956:1081#0/1 
NTGCGATCTCAGTCTCCTGAGTAGCTGGGATCTAGCACTCAGAAATGAGAGATGAAAAGGCTAATTCACAAAGTAGCCAAAAATA
+
BPPPNWWWWW__b__b_bb_____b_b__b__b_bb_bbb______________bb_____b__bbb__bYYYWY________YO
@SOLEXA2_0414:3:1:14801:1076#0/1 
NTGCGATGGACCAGCTGGAAAATTGGTGTTGTCGTCGGTGCAAATTCTGTCACGTTTGTGGAAGGCGACATCAGGCTACAAGGGG
+
BBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBB
@SOLEXA2_0414:3:1:16010:1079#0/1 
NAGCAATTACTCTGAATCTCCCGCAGTGTCCTCTGCCTAGGACAAACCAGACCTTACAACTGTTACTCTGAATCTCCCG
+
BKJQQVWVVV_______________WYYYY_______________V____Y[[[[________________________
@SOLEXA2_0414:3:1:17165:1075#0/1 
N
+
B
@SOLEXA2_0414:3:1:19504:1081#0/1 
NAGCAATACTTCTATCTTCCCATGTTCTTACTATAGTTTGTGTATTGCCAAGTCTGTTGTGAGCCACATAATAAGGTGTCAAAAT
+
BJJOJRRQQRYYYYY__b_______[[[[PWWTWWYYYYY[Y[[[YYYYUTTWVVY[YY[_______________VTTTVTVVTV
@SOLEXA2_0414:3:1:19703:1080#0/1 
NAGCAATATTGAATTAAATATATGCCAGTGGACTACTAAAACCCAAAGTATATAA
+
BIKOIVWVVVY[Y[YVVTVTYYYYY_W___BBBBBBBBBBBBBBBBBBBBBBBBB
@SOLEXA2_0414:3:1:6962:1084#0/1 
NTGCGATCTGAATCTCCCGCAGTGTCCGGGTGGGGTCAGAAAAATGGGCAGCTCAACTGCAGGTACACGTAGTGCGACCAGTGCC
+
BEMEEKLQJJ__________Y[[[[XXXXXXWQQQQYYYY__QQQ___PWWWXWV_____BBBBBBBBBBBBBBBBBBBBBBBBB
@SOLEXA2_0414:3:1:8715:1091#0/1 
NTGCGATCAACCATTCAGACACCAGCAGAAGTGTTCTGGAATCCTATGTGAGGGACATACATTCAGACCACGGCAGAAGTGTTCT
+
BGKEEHMKHL[[[[[_____Y[[[[_______________W_________YYYYY_______________[[Y[Y[[[Y[[[[[[
@SOLEXA2_0414:3:1:12077:1083#0/1 
NAGCAATATGCTTTGGCCACAAAATAAGTGCACTGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACATTTTGA
+
BJJJJQRPPObbb____b__b__QQQQQ_________b_____b_[[[[[______V_____________b____YY[[[b___O
@SOLEXA2_0414:3:1:13392:1083#0/1 
NTGCGATCCGGACACTGCGGGAGATTCAGAGTAACAGTTGTAAGGTCTGGTTTGTCCTATTTGTGTTTGAATTTGGCTCTACGTG
+
BKJQJORQPP_______________TWTWTWWWTTYYYYY_____YYYYWYYYYYYYYYYWWWWWVVTTV______Y_______B
@SOLEXA2_0414:3:1:14856:1092#0/1 
NTGCGATGTGTCCTTAGGACAAACCAGACCTTACAACTGTAAGCCTGGCTTACTCTGAATCTCCCGCAGTGTCCTCTGCCTAGGA
+
BIIOHTTSTT_____[[[[YYYYYYVYYYY______________W[[[YY__________V[[[[____WXVVXX___W_XXWXV
@SOLEXA2_0414:3:1:17070:1089#0/1 
NTGCGATCTGAATCTCCCGCAGTGTCCCACTCTTAGGTCACTTAGCATGTTCATTAGAGTACTCTGAATCTCCCGCAGTGTCCTC
+
BHMOGRTTTTY[[[Y__________TVVVTYVYYY____WYYYYRPRWRR[[Y[[_____WWWTWWTWWWYYYYY[R[[YYYYYY
@SOLEXA2_0414:3:1:18860:1082#0/1 
NAGCAATACAGTTGTAAGGTCTGGTTTGTCCTCACTCAAATGTCATCTCGAATTGTAGTTCTCATAAT
+
BHOKHSWTTT____________________BBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBB
@SOLEXA2_0414:3:1:18912:1089#0/1 
N
+
B
@SOLEXA2_0414:3:1:3923:1105#0/1 
NAGCAATAGTCCAGGGATACAGAACCCACTGATACAGAGGCCCAGCTGTAGTTCTATTATTGCTCAGATCGGAAGAGCGGTTCAG
+
BNNNQVWVVV__bbb__b_bb____b________b__Z_______[[[[YYYYYY_____b___bb____YWWYYVVTVVYYYYY
@SOLEXA2_0414:3:1:6494:1099#0/1 
N
+
B
@SOLEXA2_0414:3:1:8413:1097#0/1 
NTGCGATCCATACCCTTCTTATATACTTTGGGTTTTAGTAGTCCACTGGCATATATTTAATTCAATACATACTCATTAAGCAATG
+
BGIGEMQLNQ_______________VXXXX_____WWXXX[YY[[_____WYRYY___________V___YLYYYYYYPY_____
@SOLEXA2_0414:3:1:9865:1095#0/1 
NCTACATTAATTGTTTTAATTTTTATTTATTTATTTTTTTGAGACGGAGTCTCGCTGATGTAGCAGATCGGAAGAGCGGTTCAGC
+
BKKJKRTTST_____QQQ_b[[[[[QQQQ_QQQbQQQQQQQ_________bb__________________[[[[Y__________
@SOLEXA2_0414:3:1:10606:1102#0/1 
NTGCGATATTTGGAACTTCATGTGTCTTTTGTATTGCTTGATAGCAGCATAGAATATGTGAGGTATTTTTGGCTACTTTGTGAAT
+
BMMMMTUTTRTTVWV_____b___b__b_QQQQ__[Y[[YYYYYY_______________[[[[[YYYQQQ____BBBBBBBBBB
@SOLEXA2_0414:3:1:11267:1102#0/1 
NCTACATTACTCTGAATCTCCCGCAGTGTCCGAGATCGCACCACTGCACCCCAGCCTGGGCGACATGTAGCA
+
BEGGEJLHIK______________RTWWWWY[Y[[________________QM__YYYYYXWJVX_____BB
@SOLEXA2_0414:3:1:13556:1104#0/1 
NTGCGATTTACAACCGTTACTCTGAATCTCCCGCAGTGTCCAGGACAAAC
+
BBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBB
@SOLEXA2_0414:3:1:13625:1097#0/1 
NTGCGATCTTACAACTGTTACTCTGAATCTCCCGCAGTGTCCAGGACAAACCAGACCTTACAACTGTATCGCAAA
+
BJKJJTUUST___b_b_____b______________________________bW_bb__bb____[[Y[YYYYYY
@SOLEXA2_0414:3:1:14055:1098#0/1 
NAGCAATCTCTGAATCTCCCGCAGTGTCCAGGACAAACCAGACCTTACAACTGTTACTCTGAATCTCCCGCAGTGTCCAGGACAA
+
BMMMNWWWWWbbb________bb_______b_^__________bbb_________bb_b__b__b__b_bb____[Y[Y[VQWVV
@SOLEXA2_0414:3:1:14195:1099#0/1 
NTGCGATCTCTGAATCTCCCGCAGTGTCCAATACTGTACTTTTTTACATAGTCATTGCTTAATGAATATGTATATCGCAAAGATC
+
BPPPNVWVWV_b__bbb____bbb__bb__b_______b___bbQQ_b___bb_bb__b____b_b____b_bb___b____b__
@SOLEXA2_0414:3:1:15892:1106#0/1 
NTGCGATAGACACATGAAGTTCCAAATTATTTTTTAACAATTTTTAAGGGAGACTGAGGCGAGAGAATCACTTGAGCCTGAGAGA
+
BPOQMVWVVV_bbb_bb_b_b__________QQQQQbbb_b_b___b__b__________b____Z___________b_b____Z
@SOLEXA2_0414:3:1:18397:1101#0/1 
NTGCGATATGGTTGATTATGTTTTTCTACATATTATTTGACATACTTCTATCTTCCCATGTTCTTACTATAGTTTGTGTATTGCC
+
BHIKHWTRTTYYYYYXXVWWYYYQQOOOWWY[[[[__QQ_WWWTWXXXWW_______________YYYYYXXXXXWWWWWYYYYR
@SOLEXA2_0414:3:1:4546:1111#0/1 
NCTACATCAAAAACATGCGTATGGACAAACCAGACCTTACAACTGTACTCTGAATCTCCCGCAGTGTCCTCTGCCTAGGACAAAC
+
BOIHKLRNMQXWWWQQ______________________________________________^_____________________Y
@SOLEXA2_0414:3:1:5840:1112#0/1 
NTGCGATCTTAAAAATTGTTAAAAAATAATTTGGAACTTCATGTGTCTTTTGTATTGCTTGATAGCAGCATAGAATATGTGAGGT
+
BQKKJRQONNKRNNL__________QQQQQVVVTTSSRSSQYYYYYYYYYQQQQ______BBBBBBBBBBBBBBBBBBBBBBBBB
@SOLEXA2_0414:3:1:6252:1110#0/1 
NTGCGATTACTCTGAATCTCCCGCAGTGTCCAATACTGTACTTTTTTACATAGTCATTGCTTAATGAATATGTATTGAATTAAAT
+
BKIKHNRROR_b____b_____________________b___bbb_QQ_______________Q_YYYYY___T________W__
@SOLEXA2_0414:3:1:6533:1111#0/1 
NCTACATGAGGGCGCTCGTTCTCCTCTAAACAAAACTTGTGGAAGGGCTCACAACAGACTTGGCAATACACAAACTATAGTAAGA
+
BPPPPWWVVV____bb_bbbbbb_bbb____bQQQQ_b___b_b_____bb_bb____b_bb__b_bbbbb__b___________
@SOLEXA2_0414:3:1:7569:1113#0/1 
NAGCAATTCTAAACAAAACTTGTGGAAGGGCTCACAACAGACTTGGCAATACACAAACTATAGTAAGAACATGGGAAGATAGAAG
+
BIKOOPTTTT_____QQQQ_YYYYYYYYYY_____YYYYY___________________________________YQYYY___Y_
@SOLEXA2_0414:3:1:7605:1117#0/1 
NAGCAATCCTTTAGTTCTAGTGTCTAGGGATATGCAAAGTCAGAAAAAAC
+
BBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBB
@SOLEXA2_0414:3:1:13482:1108#0/1 
NCTACATCTGAATCTCCCGCAGTGTCCGAGATCGCACCACTGCACCCCAGCCTGGGCGACAGCGAGACTCCGTCTCAAAAAAATA
+
BLLLQVWWWVbb__bb___b_____b_____bb_b____________QQ_bbb_bY____OTVVOYVYYYVVSTTWWTTWYQQQQ
@SOLEXA2_0414:3:1:14990:1109#0/1 
NTGCGATCTGGTTTGTCCTAGGCAGAGGACACTGCGGGAGATTCAGAGTAACAGTTGTAAGGCCTGGTTTGTCCTGGACACTGCG
+
BIGGJNRPOOYYYYYVWXWV_____YYRPWYYYYYXWWRWYYYYYVVTVTXXVWX_________Y[Y[[[_____YYYYY_____
@SOLEXA2_0414:3:1:15871:1113#0/1 
NTGCGATATTTTTAAGGGAGACTGAGGCGAGAGAATCACTTGAGCCTGAGAGATCATGAGGACTCTTATAGGCCATGCTAAGACG
+
BJJOHRTRTT[QQQ[___b____b______[V[[[bbbbb_b___b_b_____________________________________
@SOLEXA2_0414:3:1:17840:1114#0/1 
NAGCAATCTCTAGATTACTTATCATACCTAATACAATGTAAATAGTTGTTATACTGTATTGTTTAGGAAATAAT
+
BOIIIVWWVV_____Y[[[[[[[W[TWTWRYYYYYY[YYY____R_____BBBBBBBBBBBBBBBBBBBBBBBB
@SOLEXA2_0414:3:1:18083:1109#0/1 
NAGCAATTACTCTGAATCTCCCGCAGTGTCCAATACTGTACTTTTTTACATAGTCATTGCTTAATGAATATGTATTGAATTAAAT
+
BBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBB
@SOLEXA2_0414:3:1:3606:1121#0/1 
NTGCGATGCATTAATTGTGTCTTTAAGGGTTAAACAGAGGCTCACAACAGACTTGACAATACACAAACTATAGTAAGAACATGGG
+
BIIKHQTTSS[[[Y[_____YYYYYTWVVV_____b___^_________________________YYYYY_____BBBBBBBBBB
@SOLEXA2_0414:3:1:4029:1119#0/1 
N
+
B
@SOLEXA2_0414:3:1:10939:1119#0/1 
NCTACATACAGTTGTAAGGTCTGGTTTGTCCTGGACACTGCGGGAGATTATGTAGCA
+
BQKQLVWVWV_____[Y[[[__________BBBBBBBBBBBBBBBBBBBBBBBBBBB
@SOLEXA2_0414:3:1:11098:1122#0/1 
NAGCAATGTTGAGTCCAGGGATACAGAACCCACTGATACAGAGGCCCAGCTGTAGTTCTATTACCAAGTTTTGTACCTTTGTAGC
+
BEMGGQQORMVVVVTWWWWWOVTVVWRWWW_______________[[T[YTVTTV_____BBBBBBBBBBBBBBBBBBBBBBBBB
@SOLEXA2_0414:3:1:12110:1126#0/1 
NTGCGATTGTAAGGTCTGGTTTGTCCTGGACACTGCGGGAGATTCAGATCGCAAAGATCGGAAGAGCGGTTCAGCAGGAATGCCG
+
BIIIHQRRRQ[[[[[b__bb_b___YYYYY_____UWWWT[T[[Y__bb_________Y______YYYYYQWWWW___S_BBBBB