Mercurial > repos > jjohnson > package_picard_1_96

changeset 0:c174844d8a74 draft default tip

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author jjohnson
date Tue, 20 Aug 2013 10:48:52 -0400
parents
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files tool_dependencies.xml
diffstat 1 files changed, 20 insertions(+), 0 deletions(-) [+]
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml	Tue Aug 20 10:48:52 2013 -0400
@@ -0,0 +1,20 @@
+<?xml version="1.0"?>
+<tool_dependency>
+    <package name="picard" version="1.96">
+        <install version="1.0">
+            <actions>
+                <action type="download_by_url">http://sourceforge.net/projects/picard/files/picard-tools/1.96/picard-tools-1.96.zip</action>
+                <action type="move_directory_files">
+                    <source_directory>picard-tools-1.96</source_directory>
+                    <destination_directory>$INSTALL_DIR/jars</destination_directory>
+                </action>
+                <action type="set_environment">
+                    <environment_variable name="PICARD_JAR_PATH" action="set_to">$INSTALL_DIR/jars</environment_variable>
+                </action>
+            </actions>
+        </install>
+        <readme>
+Installs Picard version 1.96 and sets the Environment Variable "PICARD_JAR_PATH" to the directory where the Picard jar files are installed.
+        </readme>
+    </package>
+</tool_dependency>