Mercurial > repos > jjohnson > gatk2
changeset 23:2f9bf8bf42b7 draft
Replace covariate DinucCovariate with ContextCovariate
author | Jim Johnson <jj@umn.edu> |
---|---|
date | Fri, 28 Dec 2012 12:34:05 -0600 (2012-12-28) |
parents | bc18c5ad280f |
children | 6460f2ba6a60 |
files | base_recalibrator.xml |
diffstat | 1 files changed, 1 insertions(+), 1 deletions(-) [+] |
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--- a/base_recalibrator.xml Fri Dec 28 12:08:47 2012 -0600 +++ b/base_recalibrator.xml Fri Dec 28 12:34:05 2012 -0600 @@ -173,7 +173,7 @@ <option value="ReadGroupCovariate" /> <option value="QualityScoreCovariate" /> <option value="CycleCovariate" /> - <option value="DinucCovariate" /> + <option value="ContextCovariate" /> <!-- covariates below were pulled from list option --> <option value="HomopolymerCovariate" /> <option value="GCContentCovariate" />