# HG changeset patch
# User Jim Johnson <jj@umn.edu>
# Date 1356719645 21600
# Node ID 2f9bf8bf42b78ec9d35115f7f4b1937c7fe816d5
# Parent  bc18c5ad280f375de096d503cbb0403c090ec553
Replace covariate DinucCovariate with ContextCovariate

diff -r bc18c5ad280f -r 2f9bf8bf42b7 base_recalibrator.xml
--- a/base_recalibrator.xml	Fri Dec 28 12:08:47 2012 -0600
+++ b/base_recalibrator.xml	Fri Dec 28 12:34:05 2012 -0600
@@ -173,7 +173,7 @@
       <option value="ReadGroupCovariate" />
       <option value="QualityScoreCovariate" />
       <option value="CycleCovariate" />
-      <option value="DinucCovariate" />
+      <option value="ContextCovariate" />
       <!-- covariates below were pulled from list option -->
       <option value="HomopolymerCovariate" />
       <option value="GCContentCovariate" />