| Fri, 01 Mar 2013 08:07:56 -0600 |
Jim Johnson |
Fix commandline template
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| Fri, 01 Mar 2013 07:52:02 -0600 |
Jim Johnson |
Fix default read filter screening
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| Thu, 28 Feb 2013 15:41:24 -0600 |
Jim Johnson |
Update tool version to 0.0.7
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| Mon, 18 Feb 2013 15:48:46 -0600 |
Jim Johnson |
Move GATK tool_dependency to a repository dependency, use 2 env vars: GATK2_NUM_THREADS and GATK2_NUM_CPU_THREADS for site threading values
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| Fri, 28 Dec 2012 14:15:14 -0600 |
Jim Johnson |
Add BQSR and plot_pdf_file options to base_recalibrator.xml
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| Fri, 28 Dec 2012 12:34:05 -0600 |
Jim Johnson |
Replace covariate DinucCovariate with ContextCovariate
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| Fri, 28 Dec 2012 12:08:47 -0600 |
Jim Johnson |
Remove thread options from base_recalibrator.xml
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| Fri, 28 Dec 2012 11:50:20 -0600 |
Jim Johnson |
Fix base_recalibrator.xml option: no_standard_covs
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| Thu, 20 Dec 2012 11:01:55 -0600 |
Jim Johnson |
Update tool_dependencies to GATK v 2.3
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| Thu, 15 Nov 2012 10:18:27 -0600 |
Jim Johnson |
base_recalibrator out_puts gatk_report
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| Thu, 01 Nov 2012 13:53:22 -0400 |
jjohnson |
Uploaded
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