log

age author description
Fri, 08 Nov 2013 13:37:14 -0600 Jim Johnson Fix tool_dependencies.xml default tip
Fri, 08 Nov 2013 13:28:44 -0600 Jim Johnson Update to new cuffdiff wrapper, add cuffdb_info.txt to cummerbund html output
Wed, 17 Jul 2013 08:25:52 -0500 Jim Johnson Add library_norm_method and dispersion_method params to cuffdiff tool.
Wed, 17 Jul 2013 07:58:39 -0500 Jim Johnson Return nonzero exit code from cuffdiff_wrapper.py on error
Sun, 21 Oct 2012 18:17:51 -0500 Jim Johnson Fix cuffdata datatype init
Fri, 19 Oct 2012 13:41:16 -0500 Jim Johnson cuffdiff_wrapper.xml - allow either gtf of gff3 format for annotation input.
Wed, 17 Oct 2012 12:00:55 -0500 Jim Johnson Add composite_file defs to datatype
Fri, 12 Oct 2012 09:56:02 -0500 Jim Johnson Add MAplot and csDendro
Thu, 11 Oct 2012 15:14:51 -0500 Jim Johnson cummerbund add MDS and PCA plots, handle errors from R
Wed, 10 Oct 2012 11:09:15 -0500 Jim Johnson Correct type for cuffdatadb in datatypes_conf.xml
Tue, 09 Oct 2012 08:09:32 -0500 Jim Johnson Add more descriptive label
Tue, 09 Oct 2012 07:43:58 -0500 Jim Johnson Add cuffdatadb datatype (cummeRbund SQLite DB) to cuffdata.py
Mon, 08 Oct 2012 16:20:35 -0500 Jim Johnson cuffdiff_mds_plot description
Mon, 08 Oct 2012 16:10:13 -0500 Jim Johnson Add cuffdiff_mds_plot for MultiDimensionalScaling plot for read_group_tracking
Mon, 08 Oct 2012 16:00:05 -0500 Jim Johnson Correct exp_diff names
Mon, 08 Oct 2012 15:26:47 -0500 Jim Johnson Added cuffdata and cuffdatadb datatypes, cuffdiff multiselect outputs
Mon, 01 Oct 2012 14:08:13 -0400 jjohnson Uploaded