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changeset 2:de024d31e777

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Correct exp_diff names
author Jim Johnson <jj@umn.edu>
date Mon, 08 Oct 2012 16:00:05 -0500
parents 6a9bc26ab8d9
children 728b0aa0df6e
files cuffdata_datasets.xml cuffdiff_wrapper.xml
diffstat 2 files changed, 6 insertions(+), 6 deletions(-) [+]
line wrap: on
line diff
--- a/cuffdata_datasets.xml	Mon Oct 08 15:26:47 2012 -0500
+++ b/cuffdata_datasets.xml	Mon Oct 08 16:00:05 2012 -0500
@@ -132,7 +132,7 @@
             <filter>'cds_read_group_tracking' in output_sel</filter>
         </data>
         <data format="tabular" name="tss_groups_exp_diff" label="${tool.name} on ${on_string}: TSS groups differential expression testing">
-            <filter>'tss_groups_exp' in output_sel</filter>
+            <filter>'tss_groups_exp_diff' in output_sel</filter>
         </data>
         <data format="tabular" name="tss_groups_fpkm_tracking" label="${tool.name} on ${on_string}: TSS groups FPKM tracking">
             <filter>'tss_groups_fpkm_tracking' in output_sel</filter>
@@ -144,7 +144,7 @@
             <filter>'tss_groups_read_group_tracking' in output_sel</filter>
         </data>
         <data format="tabular" name="isoforms_exp_diff" label="${tool.name} on ${on_string}: transcript differential expression testing">
-            <filter>'isoforms_exp' in output_sel</filter>
+            <filter>'isoforms_exp_diff' in output_sel</filter>
         </data>
         <data format="tabular" name="isoforms_fpkm_tracking" label="${tool.name} on ${on_string}: transcript FPKM tracking">
             <filter>'isoforms_fpkm_tracking' in output_sel</filter>
@@ -156,7 +156,7 @@
             <filter>'isoforms_read_group_tracking' in output_sel</filter>
         </data>
         <data format="tabular" name="genes_exp_diff" label="${tool.name} on ${on_string}: gene differential expression testing">
-            <filter>'genes_exp' in output_sel</filter>
+            <filter>'genes_exp_diff' in output_sel</filter>
         </data>
         <data format="tabular" name="genes_fpkm_tracking" label="${tool.name} on ${on_string}: gene FPKM tracking">
             <filter>'genes_fpkm_tracking' in output_sel</filter>
--- a/cuffdiff_wrapper.xml	Mon Oct 08 15:26:47 2012 -0500
+++ b/cuffdiff_wrapper.xml	Mon Oct 08 16:00:05 2012 -0500
@@ -237,7 +237,7 @@
             <filter>output_sel and 'cds_read_group_tracking' in output_sel</filter>
         </data>
         <data format="tabular" name="tss_groups_exp_diff" label="${tool.name} on ${on_string}: TSS groups differential expression testing">
-            <filter>output_sel and 'tss_groups_exp' in output_sel</filter>
+            <filter>output_sel and 'tss_groups_exp_diff' in output_sel</filter>
         </data>
         <data format="tabular" name="tss_groups_fpkm_tracking" label="${tool.name} on ${on_string}: TSS groups FPKM tracking">
             <filter>output_sel and 'tss_groups_fpkm_tracking' in output_sel</filter>
@@ -249,7 +249,7 @@
             <filter>output_sel and 'tss_groups_read_group_tracking' in output_sel</filter>
         </data>
         <data format="tabular" name="isoforms_exp_diff" label="${tool.name} on ${on_string}: transcript differential expression testing">
-            <filter>output_sel and 'isoforms_exp' in output_sel</filter>
+            <filter>output_sel and 'isoforms_exp_diff' in output_sel</filter>
         </data>
         <data format="tabular" name="isoforms_fpkm_tracking" label="${tool.name} on ${on_string}: transcript FPKM tracking">
             <filter>output_sel and 'isoforms_fpkm_tracking' in output_sel</filter>
@@ -261,7 +261,7 @@
             <filter>output_sel and 'isoforms_read_group_tracking' in output_sel</filter>
         </data>
         <data format="tabular" name="genes_exp_diff" label="${tool.name} on ${on_string}: gene differential expression testing">
-            <filter>output_sel and 'genes_exp' in output_sel</filter>
+            <filter>output_sel and 'genes_exp_diff' in output_sel</filter>
         </data>
         <data format="tabular" name="genes_fpkm_tracking" label="${tool.name} on ${on_string}: gene FPKM tracking">
             <filter>output_sel and 'genes_fpkm_tracking' in output_sel</filter>