Mercurial > repos > jjohnson > cdhit
comparison tool_dependencies.xml @ 7:3961e84d6225
Add install PREFIX to make command in tool_dependencies.xml
| author | Jim Johnson <jj@umn.edu> |
|---|---|
| date | Thu, 13 Sep 2012 14:46:50 -0500 |
| parents | f0c20796d33a |
| children | 438677e99ef8 |
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| 6:f0c20796d33a | 7:3961e84d6225 |
|---|---|
| 2 <tool_dependency> | 2 <tool_dependency> |
| 3 <package name="cd-hit" version="4.6.1"> | 3 <package name="cd-hit" version="4.6.1"> |
| 4 <install version="1.0"> | 4 <install version="1.0"> |
| 5 <actions> | 5 <actions> |
| 6 <action type="download_by_url">http://cdhit.googlecode.com/files/cd-hit-v4.6.1-2012-08-27.tgz</action> | 6 <action type="download_by_url">http://cdhit.googlecode.com/files/cd-hit-v4.6.1-2012-08-27.tgz</action> |
| 7 <action type="shell_command">make openmp=yes</action> | 7 <action type="shell_command">mkdir -p $INSTALL_DIR/bin/</action> |
| 8 <action type="shell_command">make openmp=yes PREFIX=$INSTALL_DIR/bin/</action> | |
| 8 <action type="set_environment"> | 9 <action type="set_environment"> |
| 9 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable> | 10 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable> |
| 10 </action> | 11 </action> |
| 11 </actions> | 12 </actions> |
| 12 </install> | 13 </install> |
| 13 <readme> | 14 <readme> |
| 14 These links provide information for building the cdhit package: | 15 These links provide information for building the cdhit package: |