Mercurial > repos > jjohnson > bcftools_roh
annotate test-data/concat.3.e.vcf @ 0:ee03050edc3d draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 21c66fb27c7e2fd21c7f7607b3b29e77e64fb86d-dirty
author | jjohnson |
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date | Sat, 25 Jun 2016 20:52:49 -0400 |
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ee03050edc3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 21c66fb27c7e2fd21c7f7607b3b29e77e64fb86d-dirty
jjohnson
parents:
diff
changeset
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1 ##fileformat=VCFv4.0 |
ee03050edc3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 21c66fb27c7e2fd21c7f7607b3b29e77e64fb86d-dirty
jjohnson
parents:
diff
changeset
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2 ##INFO=<ID=DP,Number=1,Type=Integer,Description="Total Depth"> |
ee03050edc3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 21c66fb27c7e2fd21c7f7607b3b29e77e64fb86d-dirty
jjohnson
parents:
diff
changeset
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3 ##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype"> |
ee03050edc3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 21c66fb27c7e2fd21c7f7607b3b29e77e64fb86d-dirty
jjohnson
parents:
diff
changeset
|
4 ##FORMAT=<ID=GQ,Number=1,Type=Integer,Description="Genotype Quality"> |
ee03050edc3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 21c66fb27c7e2fd21c7f7607b3b29e77e64fb86d-dirty
jjohnson
parents:
diff
changeset
|
5 ##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Read Depth"> |
ee03050edc3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 21c66fb27c7e2fd21c7f7607b3b29e77e64fb86d-dirty
jjohnson
parents:
diff
changeset
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6 ##FILTER=<ID=q10,Description="Quality below 10"> |
ee03050edc3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 21c66fb27c7e2fd21c7f7607b3b29e77e64fb86d-dirty
jjohnson
parents:
diff
changeset
|
7 ##contig=<ID=2,length=62435964> |
ee03050edc3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 21c66fb27c7e2fd21c7f7607b3b29e77e64fb86d-dirty
jjohnson
parents:
diff
changeset
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8 #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT A B |
ee03050edc3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 21c66fb27c7e2fd21c7f7607b3b29e77e64fb86d-dirty
jjohnson
parents:
diff
changeset
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9 2 310 . T A 246 PASS DP=10 GT 0|1 0|1 |
ee03050edc3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 21c66fb27c7e2fd21c7f7607b3b29e77e64fb86d-dirty
jjohnson
parents:
diff
changeset
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10 2 320 . T A 246 PASS DP=10 GT 0|1 0|1 |
ee03050edc3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 21c66fb27c7e2fd21c7f7607b3b29e77e64fb86d-dirty
jjohnson
parents:
diff
changeset
|
11 2 330 . T A 246 PASS DP=10 GT 0|1 0|1 |
ee03050edc3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 21c66fb27c7e2fd21c7f7607b3b29e77e64fb86d-dirty
jjohnson
parents:
diff
changeset
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12 2 340 . T A 246 PASS DP=10 GT 0|1 0|1 |
ee03050edc3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 21c66fb27c7e2fd21c7f7607b3b29e77e64fb86d-dirty
jjohnson
parents:
diff
changeset
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13 2 350 . T A 246 PASS DP=10 GT 0|1 0|1 |
ee03050edc3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 21c66fb27c7e2fd21c7f7607b3b29e77e64fb86d-dirty
jjohnson
parents:
diff
changeset
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14 2 360 . T A 246 PASS DP=10 GT 0|1 0|1 |
ee03050edc3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 21c66fb27c7e2fd21c7f7607b3b29e77e64fb86d-dirty
jjohnson
parents:
diff
changeset
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15 2 370 . T A 246 PASS DP=10 GT 0|1 0|1 |
ee03050edc3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 21c66fb27c7e2fd21c7f7607b3b29e77e64fb86d-dirty
jjohnson
parents:
diff
changeset
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16 2 380 . T A 246 PASS DP=10 GT 0|1 0|1 |
ee03050edc3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 21c66fb27c7e2fd21c7f7607b3b29e77e64fb86d-dirty
jjohnson
parents:
diff
changeset
|
17 2 390 . T A 246 PASS DP=10 GT 0|1 0|1 |
ee03050edc3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 21c66fb27c7e2fd21c7f7607b3b29e77e64fb86d-dirty
jjohnson
parents:
diff
changeset
|
18 2 490 . T A 246 PASS DP=10 GT 0|1 0|1 |
ee03050edc3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 21c66fb27c7e2fd21c7f7607b3b29e77e64fb86d-dirty
jjohnson
parents:
diff
changeset
|
19 2 500 . T A 246 PASS DP=10 GT 0|1 0|1 |
ee03050edc3d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 21c66fb27c7e2fd21c7f7607b3b29e77e64fb86d-dirty
jjohnson
parents:
diff
changeset
|
20 2 510 . T A 246 PASS DP=10 GT 0|1 0|1 |