Mercurial > repos > jfb > commonality_finder
changeset 5:108605ff951d draft default tip
Uploaded
author | jfb |
---|---|
date | Wed, 23 May 2018 15:25:12 -0400 |
parents | 8931bea806a6 |
children | |
files | C and D finder/CandD.xml |
diffstat | 1 files changed, 13 insertions(+), 6 deletions(-) [+] |
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--- a/C and D finder/CandD.xml Wed May 23 15:07:26 2018 -0400 +++ b/C and D finder/CandD.xml Wed May 23 15:25:12 2018 -0400 @@ -4,15 +4,22 @@ <requirement type="package">R</requirement> </requirements> <command><![CDATA[ + ln -s '$input1' input1.csv && + ln -s '$input2' input2.csv && + ln -s '$input3' input3.csv && + ln -s '$input4' input4.csv && + ln -s '$input5' input5.csv && + ln -s '$input6' input6.csv && + Rscript '$__tool_directory__/CandD.R' NO NO YES ]]></command> <inputs> - <param format="csv" name="input1.csv" type="data" label="First Substrate Set"/> - <param format="csv" name="input2.csv" type="data" label="First Substrate Background Frequency"/> - <param format="csv" name="input3.csv" type="data" label="Second Substrate Set"/> - <param format="csv" name="input4.csv" type="data" label="Second Substrate Background Frequency"/> - <param format="csv" name="input5.csv" type="data" label="Third Substrate Set"/> - <param format="csv" name="input6.csv" type="data" label="Third Substrate Background Frequency"/> + <param format="csv" name="input1" type="data" label="First Substrate Set"/> + <param format="csv" name="input2" type="data" label="First Substrate Background Frequency"/> + <param format="csv" name="input3" type="data" label="Second Substrate Set"/> + <param format="csv" name="input4" type="data" label="Second Substrate Background Frequency"/> + <param format="csv" name="input5" type="data" label="Third Substrate Set"/> + <param format="csv" name="input6" type="data" label="Third Substrate Background Frequency"/> <param name="outGroup" type="text" value="kinase" label="Kinase Name"/> </inputs> <outputs>