Mercurial > repos > jeremie > package_breakdancer_1_2_6

changeset 10:fb7dbae3646e draft

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Uploaded
author jeremie
date Thu, 26 Jun 2014 09:57:19 -0400
parents 84b00b4458c3
children 6d42b5b48927
files tool_dependencies.xml
diffstat 1 files changed, 18 insertions(+), 17 deletions(-) [+]
line wrap: on
line diff
--- a/tool_dependencies.xml	Thu Jun 26 09:35:53 2014 -0400
+++ b/tool_dependencies.xml	Thu Jun 26 09:57:19 2014 -0400
@@ -1,21 +1,22 @@
 <?xml version="1.0"?>
 <tool_dependency>
-    <package name="breakdancer-max" version="1.2.6">
-        <install version="1.0">
-            <actions>
-                <!-- <action type="download_by_url">https://drive.google.com/file/d/0B-NlbBomCRJYSE83UE5IQlUtb0U/edit?usp=sharing</action> -->
-                <action type="shell_command">ls</action>
-                <action type="shell_command">pwd</action>
-                <action type="shell_command">cp breakdancer-max $INSTALL_DIR/bin</action>
-                <action type="shell_command">cp bam2cfg.pl $INSTALL_DIR/bin</action>
-                <action type="shell_command">cp breakdancer2vcf.py $INSTALL_DIR/bin</action>
-                <action type="set_environment">
-                    <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
-                </action>
-            </actions>
-        </install>
-        <readme>
-        </readme>
-    </package>
+	<package name="breakdancer-max" version="1.2.6">
+		<install version="1.0">
+			<actions>
+				<action type="download_by_url">https://www.dropbox.com/s/5ohzuxo07x0uprc/1.2.6.tar.gz</action>
+				<action type="shell_command">ls</action>
+				<action type="shell_command">pwd</action>
+				<!-- <action type="shell_command">echo $dependency_dir</action> -->
+				<action type="shell_command">cp breakdancer-max $INSTALL_DIR/bin</action>
+				<action type="shell_command">cp bam2cfg.pl $INSTALL_DIR/bin</action>
+				<action type="shell_command">cp breakdancer2vcf.py $INSTALL_DIR/bin</action>
+				<action type="set_environment">
+					<environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
+				</action>
+			</actions>
+		</install>
+		<readme>
+		</readme>
+	</package>
 </tool_dependency>