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0
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1 <?xml version="1.0"?>
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2 <tool_dependency>
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33
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3 <package name="breakdancer" version="1.2.6">
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4 <install version="1.0">
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35
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5 <actions_group>
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6 <actions architecture="i386" os="linux">
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7 <action type="download_by_url">http://depot.galaxyproject.org/package/linux/i386/freebayes/freebayes-0.9.6_9608597d-Linux-i686.tgz</action>
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35
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8 <action type="move_directory_files">
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9 <source_directory>.</source_directory>
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10 <destination_directory>$INSTALL_DIR/bin</destination_directory>
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11 </action>
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45
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12 </actions>
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13 <actions architecture="x86_64" os="linux">
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47
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14 <action type="download_by_url">http://7cv3od97gg.1fichier.com/1_2_6.tar.gz</action>
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45
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15 <action type="move_directory_files">
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16 <source_directory>.</source_directory>
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17 <destination_directory>$INSTALL_DIR/bin</destination_directory>
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18 </action>
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19 </actions>
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20 <actions architecture="x86_64" os="darwin">
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21 <action type="download_by_url">http://depot.galaxyproject.org/package/darwin/x86_64/freebayes/freebayes-0.9.6_9608597d-Darwin-x86_64.tgz</action>
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22 <action type="move_directory_files">
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23 <source_directory>.</source_directory>
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24 <destination_directory>$INSTALL_DIR/bin</destination_directory>
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25 </action>
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26 </actions>
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33
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27 <action type="set_environment">
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28 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
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29 </action>
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35
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30 </actions_group>
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33
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31 </install>
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32 <readme>
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35
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33 FreeBayes requires g++ and the standard C and C++ development libraries.
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34 Additionally, cmake is required for building the BamTools API.
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33
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35 </readme>
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36 </package>
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35
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37 </tool_dependency> |