view myTools/toolExample.xml @ 0:65489579eace draft

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<tool id="fa_gc_content_1" name="Compute GC content">
  <description>for each sequence in a file</description>
  <command interpreter="perl">toolExample.pl $input $output</command>
  <inputs>
    <param format="fasta" name="input" type="data" label="Source file"/>
  </inputs>
  <outputs>
    <data format="tabular" name="output" />
  </outputs>

  <tests>
    <test>
      <param name="input" value="input.fa"/>
      <output name="out_file1" file="testoutput.txt"/>
    </test>
  </tests>

  <help>
This tool computes GC content from a FASTA file.
  </help>

<tests>
    <test>
      <param name="input1" value="in.fa" />
      <output name="output" file="out.txt" />     
    </test>
</tests>

</tool>