Mercurial > repos > jankanis > blast2html2
changeset 64:b68c04bf6912
work around missing ld library path for libxml
| author | Jan Kanis <jan.code@jankanis.nl> |
|---|---|
| date | Tue, 03 Jun 2014 16:12:50 +0200 |
| parents | fb823a59918f |
| children | c546e759bf2a |
| files | tool_dependencies.xml |
| diffstat | 1 files changed, 4 insertions(+), 2 deletions(-) [+] |
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--- a/tool_dependencies.xml Wed May 28 16:55:11 2014 +0200 +++ b/tool_dependencies.xml Tue Jun 03 16:12:50 2014 +0200 @@ -43,12 +43,14 @@ </action> <action type="set_environment"> - <!-- Remove any incoming PYTHONPATH elements from Galaxy's own environment --> + <!-- Remove any incoming PYTHONPATH elements from Galaxy's own environment --> <environment_variable name="PYTHONPATH" action="set_to">$INSTALL_DIR/blast2html_venv/lib/python3.4/site-packages</environment_variable> <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/blast2html_venv/bin</environment_variable> <environment_variable name="PYTHONHOME" action="set_to"></environment_variable> - <!-- To find shared libraries such as libssl or libxml2 --> + <!-- To find shared libraries such as libssl or libxml2 --> <environment_variable name="LD_LIBRARY_PATH" action="prepend_to">$ENV[LD_LIBRARY_PATH]</environment_variable> + <!-- libxml2 doesn't actually export its own LD_LIBRARY_PATH --> + <environment_variable name="LD_LIBRARY_PATH" action="prepend_to">$ENV[LIBXML_ROOT_PATH]/lib</environment_variable> </action> </actions> </install>