Mercurial > repos > jankanis > blast2html2
changeset 51:b15a20c2372a
fix python 2 compatibility
| author | Jan Kanis <jan.code@jankanis.nl> |
|---|---|
| date | Wed, 21 May 2014 18:34:35 +0200 |
| parents | bfc82a8aa3c9 |
| children | d6c7b5de2833 |
| files | blast2html.py blast2html.xml tool_dependencies.xml |
| diffstat | 3 files changed, 15 insertions(+), 2 deletions(-) [+] |
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--- a/blast2html.py Wed May 21 18:17:03 2014 +0200 +++ b/blast2html.py Wed May 21 18:34:35 2014 +0200 @@ -13,6 +13,7 @@ import warnings from os import path from itertools import repeat +import six import argparse from lxml import objectify import jinja2 @@ -22,7 +23,7 @@ _filters = {} def filter(func_or_name): "Decorator to register a function as filter in the current jinja environment" - if isinstance(func_or_name, str): + if isinstance(func_or_name, six.string_types): def inner(func): _filters[func_or_name] = func.__name__ return func
--- a/blast2html.xml Wed May 21 18:17:03 2014 +0200 +++ b/blast2html.xml Wed May 21 18:34:35 2014 +0200 @@ -4,6 +4,7 @@ <requirements> <requirement type="package" version="v0.0.18">blast_datatypes</requirement> + <requirement name="package" version="1.3.0">six</requirement> <requirement name="package" version="1.2.1">argparse</requirement> <requirement name="package" version="2.2.3">lxml</requirement> <requirement name="package" version="2.7.2">jinja2</requirement>
--- a/tool_dependencies.xml Wed May 21 18:17:03 2014 +0200 +++ b/tool_dependencies.xml Wed May 21 18:34:35 2014 +0200 @@ -25,7 +25,18 @@ </install> <readme>The Python argparse library. This is included in the stdlib for python 2.7 and up, but not for 2.6</readme> </package> - + + <package name="python_six" version="1.3.0"> + <install version="1.0"> + <actions> + <action type="setup_virtualenv"> + six >= 1.3.0 + </action> + </actions> + </install> + <readme>The Python six library for python 2/3 compatibility</readme> + </package> + <package name="lxml" version="2.2.3"> <install version="1.0"> <actions>