Mercurial > repos > jankanis > blast2html
annotate test-data/refresh_test_results.sh @ 108:b3b5ee557170 draft
update test
author | Jan Kanis <jan.code@jankanis.nl> |
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date | Mon, 07 Jul 2014 11:42:43 +0200 |
parents | e780606b7c25 |
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3bb5da68305e
add test update script, add url to github page
Jan Kanis <jan.code@jankanis.nl>
parents:
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1 #!/bin/sh |
3bb5da68305e
add test update script, add url to github page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff
changeset
|
2 |
3bb5da68305e
add test update script, add url to github page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff
changeset
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3 # run this from the directory it exists in to update the test outputs |
3bb5da68305e
add test update script, add url to github page
Jan Kanis <jan.code@jankanis.nl>
parents:
diff
changeset
|
4 |
79 | 5 set -eu |
6 | |
108 | 7 for i in 1 2 3 4 |
8 do | |
9 "$@" ../blast2html.py -i "blast xml example$i.xml" -o "blast xml example$i.html" | |
10 done | |
101
e780606b7c25
test new command line parameters, fix small bug
Jan Kanis <jan.code@jankanis.nl>
parents:
79
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changeset
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11 |
108 | 12 "$@" ../blast2html.py -i "blast xml example3.xml" -o "blast xml example3b.html" --genelink-template 'http://example.com/example-genebank?id={fullid}' |
13 "$@" ../blast2html.py -i "blast xml example4.xml" -o "blast xml example4b.html" --db-config-dir . | |
14 |