Mercurial > repos > iuc > suite_bcftools_1_3

changeset 9:e46603066228 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 2684e1443f03bfe2ae20c31d23817415ec8f7e69
author iuc
date Thu, 21 Feb 2019 15:53:54 -0500
parents bd6f4da0f48b
children 844c4174c585
files repository_dependencies.xml
diffstat 1 files changed, 35 insertions(+), 34 deletions(-) [+]
line wrap: on
line diff
--- a/repository_dependencies.xml	Tue Dec 12 13:54:56 2017 -0500
+++ b/repository_dependencies.xml	Thu Feb 21 15:53:54 2019 -0500
@@ -1,34 +1,35 @@
-<?xml version="1.0"?>
-<repositories description="A suite of Galaxy tools designed to work with version 1.3 of the bcftools package.">  <repository changeset_revision="8eb7072862e7" name="bcftools_consensus" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="809c78d54029" name="bcftools_plugin_color_chrs" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="f558d5e8c6c2" name="bcftools_plugin_tag2tag" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="8f77f1d1bf68" name="bcftools_stats" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="ec981c65fb96" name="bcftools_merge" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="888243e4a041" name="bcftools_reheader" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="bfb17b9ccffb" name="bcftools_norm" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="2319d958cee5" name="bcftools_plugin_fixploidy" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="fe17e4095e94" name="bcftools_plugin_dosage" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="7ca1ab8424c5" name="bcftools_plugin_fill_tags" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="a7705b688cb6" name="bcftools_plugin_frameshifts" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="de493f0441e2" name="bcftools_gtcheck" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="5684f5553b18" name="bcftools_plugin_mendelian" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="b98103eda224" name="bcftools_annotate" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="a271ef44d95a" name="bcftools_plugin_missing2ref" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="a1027c6d3bce" name="bcftools_filter" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="32cf922f3519" name="bcftools_csq" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="82e3b35d30d6" name="bcftools_roh" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="b5a5f02cf16d" name="bcftools_query_list_samples" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="02fa74909d07" name="bcftools_convert_to_vcf" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="e3a7e2b410e7" name="bcftools_query" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="21476af101fd" name="bcftools_isec" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="28402526020b" name="bcftools_concat" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="d645ea22d17c" name="bcftools_plugin_setgt" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="74d4b9d14047" name="bcftools_view" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="de29d05b1a12" name="bcftools_convert_from_vcf" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="b6e7353fde05" name="bcftools_plugin_impute_info" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="f80567a9b613" name="bcftools_plugin_counts" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="6180665df8f7" name="bcftools_call" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="410cdd7cf2bc" name="bcftools_mpileup" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="59203c3ea83b" name="bcftools_plugin_fill_an_ac" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="cf04a2b99851" name="bcftools_cnv" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-</repositories>
+<?xml version="1.0" ?>
+<repositories description="A suite of Galaxy tools designed to work with version 1.3 of the bcftools package.">
+    <repository changeset_revision="f31c7695a6e5" name="bcftools_consensus" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="809c78d54029" name="bcftools_plugin_color_chrs" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="608f0094585f" name="bcftools_plugin_tag2tag" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="96fe8635d07d" name="bcftools_stats" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="a2001cf27fab" name="bcftools_merge" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="2234efb87839" name="bcftools_reheader" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="05afd752df18" name="bcftools_norm" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="228d79b799dc" name="bcftools_plugin_fixploidy" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="8c2453c32ab5" name="bcftools_plugin_dosage" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="1518219b966b" name="bcftools_plugin_fill_tags" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="a7705b688cb6" name="bcftools_plugin_frameshifts" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="2ba1da9c7f89" name="bcftools_gtcheck" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="fa3a07122ac9" name="bcftools_plugin_mendelian" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="56cedea67e71" name="bcftools_annotate" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="d43b5e0cbf74" name="bcftools_plugin_missing2ref" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="10ee6ff77d77" name="bcftools_filter" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="d382bcadbdba" name="bcftools_csq" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="2fb51a247583" name="bcftools_roh" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="458e76846604" name="bcftools_query_list_samples" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="45d35a05dbaa" name="bcftools_convert_to_vcf" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="8e464dda9ad5" name="bcftools_query" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="75428e72ed50" name="bcftools_isec" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="50554a5bc884" name="bcftools_concat" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="1e4d7ee505f1" name="bcftools_plugin_setgt" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="543df0a9e890" name="bcftools_view" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="6c6b5c192e0c" name="bcftools_convert_from_vcf" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="85386d87021f" name="bcftools_plugin_impute_info" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="71425c50a7cc" name="bcftools_plugin_counts" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="56e6dfc9f4bb" name="bcftools_call" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="4422d017fe79" name="bcftools_mpileup" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="b6b0e0420959" name="bcftools_plugin_fill_an_ac" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
+    <repository changeset_revision="3db02178fb4d" name="bcftools_cnv" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
+</repositories>
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