Mercurial > repos > iuc > suite_bcftools_1_3

changeset 5:9bda2af61f24 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 9d03fe38504a35d11660dadb44cb1beee32fcf4e
author iuc
date Thu, 13 Apr 2017 17:40:42 -0400
parents 80511639987a
children ac296d7ed179
files repository_dependencies.xml
diffstat 1 files changed, 30 insertions(+), 29 deletions(-) [+]
line wrap: on
line diff
--- a/repository_dependencies.xml	Sat Mar 11 17:57:01 2017 -0500
+++ b/repository_dependencies.xml	Thu Apr 13 17:40:42 2017 -0400
@@ -1,33 +1,34 @@
 <?xml version="1.0"?>
-<repositories description="A suite of Galaxy tools designed to work with version 1.3 of the bcftools package.">  <repository changeset_revision="bc0d934b106c" name="bcftools_annotate" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="1ba57c02c7ca" name="bcftools_call" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="f0326721c12d" name="bcftools_cnv" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="21f4a914f1aa" name="bcftools_concat" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="a50824596729" name="bcftools_consensus" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="e6f4932ceb70" name="bcftools_convert_from_vcf" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="dccf11c79157" name="bcftools_convert_to_vcf" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="3c1661895a78" name="bcftools_filter" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="136c33afeacc" name="bcftools_gtcheck" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="4e32e1dbc2ba" name="bcftools_isec" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="93a0482ec0bd" name="bcftools_merge" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="59268ce456d1" name="bcftools_norm" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+<repositories description="A suite of Galaxy tools designed to work with version 1.3 of the bcftools package.">  <repository changeset_revision="1530819c362f" name="bcftools_view" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="60c59645991b" name="bcftools_mpileup" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="cc7715d75c03" name="bcftools_convert_to_vcf" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="d1bfeb61669e" name="bcftools_plugin_mendelian" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="cdef0358c8be" name="bcftools_roh" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
   <repository changeset_revision="809c78d54029" name="bcftools_plugin_color_chrs" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="3443c8a9a4ba" name="bcftools_plugin_counts" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="7d7d7c553384" name="bcftools_plugin_dosage" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="14af5e9cb493" name="bcftools_plugin_fill_an_ac" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="a914ca935346" name="bcftools_plugin_fill_tags" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="5a4073ad1140" name="bcftools_plugin_fixploidy" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="6a772f5a9816" name="bcftools_filter" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="4b0773215cdb" name="bcftools_plugin_tag2tag" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="686c9f78b5e8" name="bcftools_norm" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="df8ac30e1d3e" name="bcftools_call" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="868ea22b7d56" name="bcftools_stats" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="07e4a0f79a58" name="bcftools_plugin_dosage" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="1f5e1c8ca5f0" name="bcftools_gtcheck" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
   <repository changeset_revision="a7705b688cb6" name="bcftools_plugin_frameshifts" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="a34d1bbfcd51" name="bcftools_plugin_impute_info" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="0e2e495eec58" name="bcftools_plugin_mendelian" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="241d263d0c4f" name="bcftools_plugin_missing2ref" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="788510a3597a" name="bcftools_plugin_setgt" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="5c10d8c31f35" name="bcftools_plugin_tag2tag" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="9bd17b5ba84f" name="bcftools_plugin_vcf2sex" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="19e871cd19ab" name="bcftools_query" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="6d65e1a21f44" name="bcftools_query_list_samples" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="24b9abf1dafd" name="bcftools_reheader" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="81049a32c117" name="bcftools_roh" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="e37d2899945c" name="bcftools_stats" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="b8f8fdd611ee" name="bcftools_view" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="71f10eb902b6" name="bcftools_convert_from_vcf" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="292e2014228a" name="bcftools_concat" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="c783dcc390ec" name="bcftools_annotate" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="d3c1978c652c" name="bcftools_cnv" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="a312a4ae01fa" name="bcftools_query" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="a969b6235227" name="bcftools_plugin_fill_tags" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="eb540984663a" name="bcftools_plugin_fixploidy" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="4ae2b3d51c48" name="bcftools_plugin_impute_info" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="3ba3fb3c1151" name="bcftools_isec" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="cdd7b69a62ff" name="bcftools_consensus" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="21b2123e25b1" name="bcftools_plugin_missing2ref" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="53e5d8d9d300" name="bcftools_plugin_counts" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="062d9ba479a6" name="bcftools_query_list_samples" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="f92bf69685c6" name="bcftools_reheader" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="daddaee88300" name="bcftools_csq" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="d2920059bf2e" name="bcftools_plugin_setgt" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="14419fc11435" name="bcftools_merge" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="a8f3b595efa8" name="bcftools_plugin_fill_an_ac" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
 </repositories>