comparison seqtk_comp.xml @ 22:f2a792351212 draft default tip

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/seqtk commit 75d5141110314addc160504e0a1f9cd66443de66

21:ac22e16bfecd

<?xml version="1.0"?>
<tool id="seqtk_comp" name="seqtk_comp" version="@TOOL_VERSION@.1">
    <description>get the nucleotide composition of FASTA/Q</description>
    <expand macro="bio_tools"/>
    <macros>
        <import>macros.xml</import>
    </macros>
    <expand macro="requirements">
        <requirement type="package" version="@AWK_VERSION@">gawk</requirement>
    </expand>
    <expand macro="stdio"/>
    <command><![CDATA[

    <inputs>
        <expand macro="in_faq"/>
        <param name="in_bed" type="data" format="bed" optional="true" label="BED file"/>
    </inputs>
    <outputs>
        <data name="default" format="tabular" label="Nucleotide composition of $in_file.name"/>
    </outputs>
    <tests>
        <test>
            <param name="in_file" value="seqtk_comp.fa" ftype="fasta"/>
            <output name="default" file="seqtk_comp.out" ftype="tabular"/>

22:f2a792351212

<?xml version="1.0"?>
<tool id="seqtk_comp" name="seqtk_comp" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="22.05">
    <description>get the nucleotide composition of FASTA/Q</description>
    <macros>
        <import>macros.xml</import>
    </macros>
    <expand macro="bio_tools"/>
    <expand macro="requirements">
        <requirement type="package" version="@AWK_VERSION@">gawk</requirement>
    </expand>
    <expand macro="stdio"/>
    <command><![CDATA[

    <inputs>
        <expand macro="in_faq"/>
        <param name="in_bed" type="data" format="bed" optional="true" label="BED file"/>
    </inputs>
    <outputs>
        <data name="default" format="tabular" label="${tool.name} on ${on_string}: Nucleotide composition"/>
    </outputs>
    <tests>
        <test>
            <param name="in_file" value="seqtk_comp.fa" ftype="fasta"/>
            <output name="default" file="seqtk_comp.out" ftype="tabular"/>