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annotate seqtk_randbase.xml @ 7:55e75a28fde7 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/seqtk commit 344140b8df53b8b7024618bb04594607a045c03a
author iuc
date Mon, 04 May 2015 22:47:23 -0400
parents 33ded39275c3
children 16f2535c08bf
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1 <?xml version="1.0"?>
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2 <tool id="seqtk_randbase" name="seqtk_randbase" version="@WRAPPER_VERSION@.0">
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3 <description>choose a random base from hets</description>
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4 <macros>
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5 <import>macros.xml</import>
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6 </macros>
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7 <expand macro="requirements"/>
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8 <expand macro="stdio"/>
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9 <command><![CDATA[seqtk randbase
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10 $in_file
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11 > $default]]></command>
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12 <inputs>
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13 <expand macro="in_faq"/>
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14 </inputs>
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15 <outputs>
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16 <data format_source="in_file" hidden="false" name="default" label="Unambiguous $in_file.name"/>
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17 </outputs>
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18 <tests>
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19 <test>
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20 <param name="in_file" value="seqtk_randbase.fa"/>
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21 <output name="default" file="seqtk_randbase.out" ftype="fasta"/>
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22 </test>
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23 </tests>
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24 <help><![CDATA[
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25 **What it does**
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26
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27 Randomly resolves ambiguous bases
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28
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29 ::
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30
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31 # Input fasta
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32 >ambig
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33 ACGTMRWSYK
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34
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35 results in
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36
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37 ::
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38
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39 # Output result
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40 >ambig
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41 ACGTCGTGTT
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42
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43 @ATTRIBUTION@
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44 ]]></help>
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55e75a28fde7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/seqtk commit 344140b8df53b8b7024618bb04594607a045c03a
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45 <expand macro="citation" />
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46 </tool>