Mercurial > repos > iuc > scanpy_normalize
changeset 5:df4124e38f46 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy/ commit 6b5d0d6f038ebd0fae5dbca02ada51555518ed85"
| author | iuc |
|---|---|
| date | Mon, 10 Feb 2020 10:18:25 +0000 |
| parents | 9270b707fb0d |
| children | 51b1da3700c1 |
| files | normalize.xml |
| diffstat | 1 files changed, 4 insertions(+), 4 deletions(-) [+] |
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--- a/normalize.xml Wed Dec 18 20:54:07 2019 +0000 +++ b/normalize.xml Mon Feb 10 10:18:25 2020 +0000 @@ -203,7 +203,7 @@ Similar functions are used, for example, by Seurat, Cell Ranger or SPRING. More details on the `scanpy documentation -<https://icb-scanpy.readthedocs-hosted.com/en/stable/api/scanpy.pp.normalize_per_cell.html>`__ +<https://icb-scanpy.readthedocs-hosted.com/en/@version@/api/scanpy.pp.normalize_per_cell.html>`__ Normalization and filtering as of Zheng et al. (2017), the Cell Ranger R Kit of 10x Genomics (`pp.recipe_zheng17`) @@ -222,7 +222,7 @@ - scale to unit variance and shift to zero mean More details on the `scanpy documentation -<https://icb-scanpy.readthedocs-hosted.com/en/stable/api/scanpy.pp.recipe_zheng17.html>`__ +<https://icb-scanpy.readthedocs-hosted.com/en/@version@/api/scanpy.pp.recipe_zheng17.html>`__ Normalization and filtering as of Weinreb et al (2017) (`pp.recipe_weinreb17`) @@ -231,7 +231,7 @@ Expects non-logarithmized data. If using logarithmized data, pass `log=False`. More details on the `scanpy documentation -<https://icb-scanpy.readthedocs-hosted.com/en/stable/api/scanpy.pp.recipe_weinreb17.html>`__ +<https://icb-scanpy.readthedocs-hosted.com/en/@version@/api/scanpy.pp.recipe_weinreb17.html>`__ Normalization and filtering as of Seurat et al (2015) (`pp.recipe_seurat`) @@ -242,7 +242,7 @@ Expects non-logarithmized data. If using logarithmized data, pass `log=False`. More details on the `scanpy documentation -<https://icb-scanpy.readthedocs-hosted.com/en/stable/api/scanpy.pp.recipe_seurat.html>`__ +<https://icb-scanpy.readthedocs-hosted.com/en/@version@/api/scanpy.pp.recipe_seurat.html>`__ ]]></help> <expand macro="citations"/>