Mercurial > repos > iuc > package_snpeff_3_6
changeset 1:807f8db26f0a draft default tip
Uploaded
author | iuc |
---|---|
date | Wed, 18 Feb 2015 11:36:02 -0500 |
parents | d782e523a77b |
children | |
files | tool_dependencies.xml |
diffstat | 1 files changed, 1 insertions(+), 0 deletions(-) [+] |
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--- a/tool_dependencies.xml Fri Aug 15 05:58:03 2014 -0400 +++ b/tool_dependencies.xml Wed Feb 18 11:36:02 2015 -0500 @@ -8,6 +8,7 @@ <source_directory>.</source_directory> <destination_directory>$INSTALL_DIR</destination_directory> </action> + <action type="shell_command">sed -i.orig -e 's;http://downloads.sourceforge.net/project/snpeff/databases;https://snpeff-data.galaxyproject.org/databases;g' $INSTALL_DIR/snpEff.config</action> <action type="set_environment"> <environment_variable name="SNPEFF_JAR_PATH" action="set_to">$INSTALL_DIR</environment_variable> </action>