Mercurial > repos > iuc > package_r_3_0_1

changeset 20:f3fb8dbdb047 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_r_3_0_1 commit 97a064489364118d108b0dd2cfb4d9bc53080837
author iuc
date Thu, 19 Nov 2015 14:13:09 -0500
parents e5c96827ef85
children 92e758fad736
files tool_dependencies.xml
diffstat 1 files changed, 3 insertions(+), 5 deletions(-) [+]
line wrap: on
line diff
--- a/tool_dependencies.xml	Mon Jun 01 22:54:11 2015 -0400
+++ b/tool_dependencies.xml	Thu Nov 19 14:13:09 2015 -0500
@@ -4,7 +4,7 @@
         <repository changeset_revision="93fad0d5cab9" name="package_readline_6_2" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
     </package>
     <package name="ncurses" version="5.9">
-        <repository changeset_revision="387c0609c0b7" name="package_ncurses_5_9" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+        <repository changeset_revision="d5587dda75ff" name="package_ncurses_5_9" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
     </package>
     <package name="R_3_0_1" version="3.0.1">
         <install version="1.0">
@@ -14,16 +14,14 @@
                     <repository changeset_revision="93fad0d5cab9" name="package_readline_6_2" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
                         <package name="readline" version="6.2" />
                     </repository>
-                    <repository changeset_revision="387c0609c0b7" name="package_ncurses_5_9" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
+                    <repository changeset_revision="d5587dda75ff" name="package_ncurses_5_9" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
                         <package name="ncurses" version="5.9" />
                     </repository>
                 </action>
-
                 <action type="shell_command">
                     ./configure CPPFLAGS=-I$READLINE_INCLUDE_PATH LDFLAGS="-L$READLINE_LIB_PATH -L$NCURSES_LIB_PATH -lreadline -lncurses" --enable-R-shlib  --with-x=no --libdir=$INSTALL_DIR/lib/ --bindir=$INSTALL_DIR/bin/ --datarootdir=$INSTALL_DIR/share/
                 </action>
-                <action type="shell_command">make</action>
-                <action type="shell_command">make install</action>
+                <action type="make_install" />
                 <action type="set_environment">
                     <environment_variable action="set_to" name="R_HOME">$INSTALL_DIR</environment_variable>
                     <environment_variable action="set_to" name="R_LIBS">$INSTALL_DIR/lib/R/library</environment_variable>